Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20erecta_20[genbank_20GCA_5F001651985.1_202016-05-25] 57 sequences; 34,747,975 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq12 136 4e-27 >seq12 Length=4193547 Score = 136 bits (150), Expect = 4e-27 Identities = 150/197 (76%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||||||||||| ||| || ||| |||||||| || |||| | | Sbjct 3448130 CTCCTTCTGGATGTTGTAGTCGCTCAGAGTTCGGCCGTCTTCGAGTTGCTTGCCGGCAAA 3448071 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATT 138541 ||| || |||||||| || || || || || || ||||| ||| || ||| | ||| Sbjct 3448070 GATGAGGCGCTGTTGATCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGATTTGACATT 3448011 Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 || | | ||||||| | ||||| ||||| | || | || || ||||||| ||| || | Sbjct 3448010 GT-CGATGGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCAGTCAAAGTCTTGA 3447952 Query 138602 CAAAAATCTGCATGGCT 138618 ||||||||||||||||| Sbjct 3447951 CAAAAATCTGCATGGCT 3447935 Score = 104 bits (114), Expect = 2e-17 Identities = 162/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | ||||| || | ||| | | || |||||||||||||||||||| || Sbjct 3448394 GCCACCACGAAGACGCAGGACAAGATGGAGTGTGGATTCCTTTTGAATGTTGTAGTCACT 3448335 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||||| |||||| | || || || | | || ||||| || ||||| || || Sbjct 3448334 GAGCGTACGACCGTCCTCCAACTGCTTTCCAGCGAAAATCAGACGTTGCTGGTCGGGTGG 3448275 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||| || ||||| ||| || || | | || | ||||||| |||| || || Sbjct 3448274 GATACCCTCCTTGTCTTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGCTCGATTCAAC 3448215 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 ||| | || | ||| || || |||||||| || ||||| || |||||| || Sbjct 3448214 CTCCAGAGTAATCGTCTTGCCGGTCAGAGTCTTGACAAAGATTTGCATGCCT 3448163 Score = 91.5 bits (100), Expect = 1e-13 Identities = 246/371 (66%), Gaps = 9/371 (2%) Strand=Plus/Minus Query 52404 GTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTAC 52463 ||||| ||||| || || ||| | || || || || |||||| | ||||| | Sbjct 1494873 GTGGCTTTCGCAGCTGTTGAAGGCATCTTCTTCTCTGGATCCTTTGCATCTATCTTCTGG 1494814 Query 52464 ATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGAC 52523 | || | || || | ||||||||||| || ||| ||||||| | || || || || Sbjct 1494813 CTCAAGAGCAAGGGACTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCTCGTGAT 1494754 Query 52524 GAAGGACTGCACACGGACTTTGCGTGCCTC-TACTACAAGACGCGCGTGACCGAAAAATT 52582 || || |||||||||| ||||| || ||| | | ||| | || || || Sbjct 1494753 GAGGGTATGCACACGGATTTTGCTTGTCTCCTGATGCAACATCTGCAGCAC----AAGCC 1494698 Query 52583 GGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTT 52642 ||| | | || | ||| | | || ||||| || ||||||||||| | Sbjct 1494697 GGACCCACAACTCATTGAAAACATTATAACCGAAGCGGTCATGATTGAAAAGGAGTTCCT 1494638 Query 52643 TACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACAT 52702 || | || || || |||| |||||||||||||| || || |||||| ||||||| Sbjct 1494637 CACCGATGCTCTCCCCGTCGCATTGCTGGGCATGAACTCGAAGCTCATGTGTCAGTACAT 1494578 Query 52703 CGAGTTTGTGGCGGATCGTCTG-TTGGTGCAGCTCGGGCAGCCAAAG-TACTTCAACGCT 52760 |||||||| || ||||||||| || ||| || ||||| | | | |||||||| || Sbjct 1494577 TGAGTTTGTCGCTGATCGTCTGCTTCTTGC--CTTGGGCAACAAGCGATACTTCAATGCA 1494520 Query 52761 CGCAATCCGTT 52771 | || ||||| Sbjct 1494519 CAAAACCCGTT 1494509 Score = 82.4 bits (90), Expect = 8e-11 Identities = 159/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || |||| | ||| || ||||| | | |||||| || ||||||||||| Sbjct 3448622 GCCACCACGCAGTCTCAACACCAAATGAAGAGTACTCTCCTTCTGGATGTTGTAGTCTGA 3448563 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || || || ||||| | || ||||||| | |||| | | ||| |||||||| || Sbjct 3448562 CAGTGTTCGGCCATCCTCCAACTGCTTACCGGCAAAGATCAATCTCTGCTGGTCCGGTGG 3448503 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564 || || || ||||| ||| | || | || | |||| | | || || | ||| Sbjct 3448502 AATGCCCTCCTTGTCC-TGAATCTTCGACTTGACGTTGT-CGATCGTATCTGAGCTCTCT 3448445 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||||||| ||| | || || |||||||||||||| ||||| || |||||| Sbjct 3448444 ACCTCGAGCGTGATTGTCTTTCCAGTCAGAGTTTTGACAAATATTTGCATG 3448394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262046413040