Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20erecta_20[genbank_20GCA_5F001651985.1_202016-05-25] 57 sequences; 34,747,975 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq45 138 1e-27 seq12 138 1e-27 seq1 91.5 2e-13 >seq45 Length=2675113 Score = 138 bits (152), Expect = 1e-27 Identities = 142/183 (78%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||| ||||| || | || |||||||||||||||||||| | Sbjct 831385 CCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCTTCGAGCTGCTTGCCGGCGAAGA 831444 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 |||||||||||||||||| ||| | || |||||||| |||||| ||||| ||| | Sbjct 831445 TCAAGCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTTGGACTTGA-CGTTG 831503 Query 46524 -CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||||| ||| || || || | |||||||| |||||||| || || || || Sbjct 831504 TCGATCGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACG 831563 Query 46583 AAG 46585 ||| Sbjct 831564 AAG 831566 >seq12 Length=4193547 Score = 138 bits (152), Expect = 1e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||| | | ||| | || ||||||| || |||||||| ||||| ||||||||| Sbjct 3448167 TGCCTCCACGGAGACGGAGGACGAGATGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGC 3448108 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 ||||| || |||| ||||| ||||||||||| || || | |||||| || |||| | Sbjct 3448107 TCAGAGTTCGGCCGTCTTCGAGTTGCTTGCCGGCAAAGATGAGGCGCTGTTGATCGGGGG 3448048 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || |||||||||| |||||| |||| | | | |||||||| || || | Sbjct 3448047 GAATGCCCTCCTTGTCCTGGATCTTGGATTTGACATTGTCGATGGTGTCGCTGGACTCGA 3447988 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || | |||||||| ||||| |||| || || ||||| || ||||| Sbjct 3447987 CCTCAAGGGTGATGGTCTTGCCAGTCAAAGTCTTGACAAAAATCTGCAT 3447939 Score = 132 bits (146), Expect = 5e-26 Identities = 169/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || | | ||||| || ||||| | ||| |||||||| || |||||||| Sbjct 3448395 TGCCACCACGAAGACGCAGGACAAGATGGAGTGTGGATTCCTTTTGAATGTTGTAGTCAC 3448336 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 || || || |||| || | |||||| || ||||| |||| || |||||||||| | Sbjct 3448335 TGAGCGTACGACCGTCCTCCAACTGCTTTCCAGCGAAAATCAGACGTTGCTGGTCGGGTG 3448276 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCC 46543 | | | ||||||||| |||||| |||||| ||| | | | |||||||||||||| Sbjct 3448275 GGATACCCTCCTTGTCTTGGATCTTGCTCTTGA-CGTTGTCGATGGTGTCGCTCGATTCA 3448217 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || |||| || || || ||||| ||||| || || |||||||||||||| Sbjct 3448216 ACCTCCAGAGTAATCGTCTTGCCGGTCAGAGTCTTGACAAAGATTTGCAT 3448167 Score = 132 bits (146), Expect = 5e-26 Identities = 162/217 (75%), Gaps = 8/217 (4%) Strand=Plus/Minus Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440 |||||||| ||| | ||||||||||| ||||| |||||||| || || || || | || Sbjct 3448607 CAACACCAAATGAAGAGTACTCTCCTTCTGGATGTTGTAGTCTGACAGTGTTCGGCCATC 3448548 Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 || | |||||| ||||| || ||||| | ||||||||| | || | || ||||||||| Sbjct 3448547 CTCCAACTGCTTACCGGCAAAGATCAATCTCTGCTGGTCCGGTGGAATGCCCTCCTTGTC 3448488 Query 46501 CATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGA 46556 | |||||| ||||| ||| | | | ||| || |||| || || || | ||||| Sbjct 3448487 CTGAATCTTCGACTTGA-CGTTGTCGATCGTATCTGAGCTC---TCTACCTCGAGCGTGA 3448432 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || || || ||||| ||||| ||||| |||||||| Sbjct 3448431 TTGTCTTTCCAGTCAGAGTTTTGACAAATATTTGCAT 3448395 >seq1 Length=4892217 Score = 91.5 bits (100), Expect = 2e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| ||||||||||| || ||||| | || ||||| |||||||||||||| Sbjct 3970632 TCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAG 3970691 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 |||| ||| |||||||| | || | || |||||||| Sbjct 3970692 ATCAGGCGTTGCTGGTCCGGAGGAATGCCTTCCTTGTC 3970729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565237997267640