Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20erecta_20[genbank_20GCA_5F001651985.1_202016-05-25] 57 sequences; 34,747,975 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq12 113 3e-20 >seq12 Length=4193547 Score = 113 bits (124), Expect = 3e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 34767 CTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCA 34826 ||||| ||||| |||| || || || ||||| ||||| ||||| || || |||| || Sbjct 3448609 CTCAACACCAAATGAAGAGTACTCTCCTTCTGGATGTTGTAGTCTGACAGTGTTCGGCCA 3448550 Query 34827 TCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34886 || |||| ||| || |||||||| || | || |||||||| | || | ||||||||| Sbjct 3448549 TCCTCCAACTGCTTACCGGCAAAGATCAATCTCTGCTGGTCCGGTGGAATGCCCTCCTTG 3448490 Query 34887 TCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATG 34946 || ||||||| |||||| | |||| || | ||| || |||| || || Sbjct 3448489 TCCTGAATCTTCGACTTGACGTTGTCGATCGTATCTGAGCTCTCTACCTCGAGCGTGATT 3448430 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || ||||| || ||||| || ||||| || ||||| Sbjct 3448429 GTCTTTCCAGTCAGAGTTTTGACAAATATTTGCAT 3448395 Score = 82.4 bits (90), Expect = 5e-11 Identities = 140/201 (70%), Gaps = 8/201 (4%) Strand=Plus/Minus Query 34785 GTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCG 34844 ||||| || ||||| ||||| ||||| || |||| | || || || || || ||| Sbjct 3448135 GTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTTCGGCCGTCTTCGAGTTGCTTGCCG 3448076 Query 34845 GCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTG 34904 ||||| || || || || || || | || | ||||||||||| ||||| |||| Sbjct 3448075 GCAAAGATGAGGCGCTGTTGATCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGATTTG 3448016 Query 34905 ACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAG 34960 || || | ||||| || | || ||| || || | ||| ||||| || || || | Sbjct 3448015 AC--AT--TGTCGATGGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCAGTCAA 3447960 Query 34961 AGTCTTCACAAAGATCTGCAT 34981 |||||| ||||| |||||||| Sbjct 3447959 AGTCTTGACAAAAATCTGCAT 3447939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633374481096