Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20erecta_20[genbank_20GCA_5F001651985.1_202016-05-25] 57 sequences; 34,747,975 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq6 111 2e-18 seq23 109 9e-18 seq12 102 1e-15 seq54 91.5 2e-12 >seq6 Length=723466 Score = 111 bits (122), Expect = 2e-18 Identities = 288/441 (65%), Gaps = 12/441 (3%) Strand=Plus/Minus Query 2071578 GACGACCTCGGTGCACAGGTTGGCCGACATCG--TGGTGCCCAGGTTCTGCTGGTTGCTG 2071635 ||| | ||| ||||| || |||| | ||| |||| |||| ||||| ||||||||| Sbjct 216241 GACAATCTCAGTGCAAAGATTGGAG--CTTCGGATGGTACCCAAGTTCTTCTGGTTGCTC 216184 Query 2071636 GTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTG 2071695 | ||||| || ||||||| ||||||||||| | ||| || || |||| ||| | Sbjct 216183 TTTCGGTTGCAAGCATCCTTGTAGAGCATGTAGGGGGTACCGGTTTCAGTCTGTGCCTCG 216124 Query 2071696 ACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGCG----CGGCCCTNNNN 2071751 | |||||| |||| | | |||| || |||| | ||| ||||||| Sbjct 216123 AGGATGGCATACCATAGCTTCTGCGCCTTGAC---GGTC-TGGCGACCACGGCCCTCCTT 216068 Query 2071752 NNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGC 2071811 | || |||| || || | |||| | || ||||| || || Sbjct 216067 CTCATATCTCTCGTACAGCGCGTTGAACTCGTCCCCGTAGACGTCAGCGAGGCCAGGTGC 216008 Query 2071812 CTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTC 2071871 ||| || || ||||| | ||| || | || | || || ||| |||||||| Sbjct 216007 CTCATGAGGACAGAAGAGTGTCCATTCTTGGTTCTTCTCGACACGTTCCATGAACAGGTC 215948 Query 2071872 GCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTT 2071931 | ||||||||| |||| || || || ||||| | | ||| || |||||||||||||| Sbjct 215947 GGGAGTCCACAGGGCGTAGAACAGGTCCCGCGCTCTGACCTCTTCTTTGCCGTGGTTCTT 215888 Query 2071932 TTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGC 2071991 | |||| | |||| | | ||| |||||||| ||||| || ||| ||||||||| Sbjct 215887 CCTGAGGTTCAAAAAGTCAAACACGTCTGCGTGCCATGGCTCGAGATAGATGGCAAAGGC 215828 Query 2071992 GCCCTTGCGCTTGCCGCCGCC 2072012 || ||||||| |||||| Sbjct 215827 ACCTGGGCGCTTGTTGCCGCC 215807 Score = 107 bits (118), Expect = 3e-17 Identities = 196/287 (68%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600 || ||||| || || || |||| ||| ||||| |||||||| || | ||||| ||||| Sbjct 215805 TGATCGACGTAACGAGCAGTGTTGTTGAAGACACGGAGCATAGGGATCAGGCCATTGGAG 215746 Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660 || |||||||| || | ||||| || | ||| || | || || | || Sbjct 215745 GTACCATTGGTGCCTGCGATGTAGGATCCTGTGGCACGAATGCAATGGGCATTGAGACCA 215686 Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720 || || || || | ||||||||| | ||||| | || || || ||||| ||||||||| Sbjct 215685 ATACCTCCCGCTGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAAATGCCCTCG 215626 Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780 || ||| | ||||| || | || |||||||| || ||| || | | || ||| Sbjct 215625 ATGCTGTCTTCTTTCATATCTATCAAGAAGCACGATGACAATTGGGGTTGAGGTGTCCCG 215566 Query 2073781 GCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACAT 2073827 |||||||| || || |||| || ||| | ||| |||||||| Sbjct 215565 GCATTGAACAGAGTCGGCGAAGCGTGGGTGAAGCACTTCTGGGACAT 215519 >seq23 Length=4102344 Score = 109 bits (120), Expect = 9e-18 Identities = 104/133 (78%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 2035629 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGG 2035688 || ||||| | ||||| || ||||||||||| || |||||| | || || ||| | || Sbjct 637038 CTATTTGAAATCATCCTGGCTGCCAACTACCTTGATATCAAGGCTCTGCTTGATGTCGGT 636979 Query 2035689 TGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTT 2035748 |||||||| || |||||| | |||||||||||||| || || || ||||||||||| || Sbjct 636978 TGCAAGACGGTTGCCAACATGATCAAGGGCAAGTCACCAGAAGAGATCCGCAAGACGTTC 636919 Query 2035749 AACATCAAGTACG 2035761 || || || ||| Sbjct 636918 AATATTCAGAACG 636906 >seq12 Length=4193547 Score = 102 bits (112), Expect = 1e-15 Identities = 212/310 (68%), Gaps = 17/310 (5%) Strand=Plus/Plus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| || || ||| ||| | |||||| ||| ||||||||||||||| || | Sbjct 1494748 ACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGTCCCTTGCT 1494807 Query 794400 CTTGAGCCAAAAGATGG---CACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC 794456 ||||||||| ||||| | || || | | | ||||| |||||||| || || || || Sbjct 1494808 CTTGAGCCAGAAGATAGATGCAAAGGATC---CAGAGAAGAAGATGCCTTCAACAGCTGC 1494864 Query 794457 -AAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTT---GATCCACTTCA 794512 |||||| ||||| || | |||||| | | | |||||||| |||||| ||| Sbjct 1494865 GAAAGCC-ACGAGTCGTTGGGCAAAGCT--CGA----CTCTTTGTCTGAGATCCATCTCA 1494917 Query 794513 TCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGT 794572 ||||| || || || || | | | || | ||||||| |||| ||| | | Sbjct 1494918 AAGCCCAGTCCGCTTTCTTGCGGATACAAGGGATTGTGTCGACGGCGTCAAACAAATACG 1494977 Query 794573 CCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGA 794632 |||||| || ||||| ||||||||||| ||||| || ||| |||| ||||||| Sbjct 1494978 TCTTCTCTTTGGGATCCTTCACGTAGGTGTCAATGAGAAGGCTGTACATCTCCGAGTGGA 1495037 Query 794633 TGTTTTCGAT 794642 | ||||| || Sbjct 1495038 TATTTTCCAT 1495047 >seq54 Length=2306725 Score = 91.5 bits (100), Expect = 2e-12 Identities = 82/103 (80%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||| ||||||||||||||||| ||||| || ||||| ||| |||| ||||| || ||| Sbjct 2052300 GTATTTGGTGACGGCCTTGGTGCCCTCAGACACGGCATGCTTGGCAAGTTCACCAGGCAG 2052359 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTG 1485573 |||||| | |||| ||||||||||| |||| | ||| ||| Sbjct 2052360 GATCAGTCTGACGGACGTCTGGATCTCTCGGGAGGAGATTGTG 2052402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916240336650023