Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20erecta_20[genbank_20GCA_5F001651985.1_202016-05-25] 57 sequences; 34,747,975 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq12 111 1e-19 seq45 104 2e-17 seq1 100 2e-16 >seq12 Length=4193547 Score = 111 bits (122), Expect = 1e-19 Identities = 156/217 (72%), Gaps = 8/217 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || || | |||||||||||||| ||||| ||||| || | || | || Sbjct 3448150 AGGACGAGATGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTTCGGCCGTCT 3448091 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || |||||||| ||||| ||||| || || || || || | || | ||||||||||| Sbjct 3448090 TCGAGTTGCTTGCCGGCAAAGATGAGGCGCTGTTGATCGGGGGGAATGCCCTCCTTGTCC 3448031 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || |||||| || | ||||| || ||| |||||| |||| ||| || Sbjct 3448030 TGGATCTTGGATTTGAC--AT--TGTCGATGGTGTCGCTGGACTCGACCTCAAGGGTGAT 3447975 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||||| || || | ||||| ||||| ||||||||| Sbjct 3447974 GGTCTTGCCAGTCAAAGTCTTGACAAAAATCTGCATG 3447938 Score = 102 bits (112), Expect = 5e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 |||| |||| |||| || ||||||||||| ||||| ||||| || || | || || Sbjct 3448609 CTCAACACCAAATGAAGAGTACTCTCCTTCTGGATGTTGTAGTCTGACAGTGTTCGGCCA 3448550 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || |||| ||||| ||||| ||||||| || |||||||| | || | ||||||||| Sbjct 3448549 TCCTCCAACTGCTTACCGGCAAAGATCAATCTCTGCTGGTCCGGTGGAATGCCCTCCTTG 3448490 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 || | || || |||||| | |||| || | ||| || || | || || Sbjct 3448489 TCCTGAATCTTCGACTTGACGTTGTCGATCGTATCTGAGCTCTCTACCTCGAGCGTGATT 3448430 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||||||| || || || || ||||| || |||||| Sbjct 3448429 GTCTTTCCAGTCAGAGTTTTGACAAATATTTGCATG 3448394 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 |||||| || || | ||| ||||| |||||||| ||||| || | || | || Sbjct 3448379 CAGGACAAGATGGAGTGTGGATTCCTTTTGAATGTTGTAGTCACTGAGCGTACGACCGTC 3448320 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 |||| |||||||| ||||| ||||| ||||||||||| | || | ||||||||||| Sbjct 3448319 CTCCAACTGCTTTCCAGCGAAAATCAGACGTTGCTGGTCGGGTGGGATACCCTCCTTGTC 3448260 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || |||||| | || | || | | || || || | || || || Sbjct 3448259 TTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGCTCGATTCAACCTCCAGAGTAATCGT 3448200 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||| || || || ||||| |||||||| |||||| Sbjct 3448199 CTTGCCGGTCAGAGTCTTGACAAAGATTTGCATG 3448166 >seq45 Length=2675113 Score = 104 bits (114), Expect = 2e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 ||||||| ||||| ||||| || | || |||| || || ||||| |||||||||| Sbjct 831385 CCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCTTCGAGCTGCTTGCCGGCGAAGA 831444 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 ||| || |||||||| |||| | || |||||||| | || || |||||| Sbjct 831445 TCAAGCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTTGGACTTGACGTTGT 831504 Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967 | |||| || | |||||| |||| ||| |||||||| |||||||||||||| || | Sbjct 831505 CGATCGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 831564 Query 34968 AG 34969 || Sbjct 831565 AG 831566 >seq1 Length=4892217 Score = 100 bits (110), Expect = 2e-16 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 || ||| ||||| | |||| |||||||| ||||| ||||| || || |||| |||| Sbjct 3970610 CAAGACGAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGGCCATC 3970669 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || |||||||| |||||||||||||| ||||||||||| | || | || |||||||| Sbjct 3970670 TTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCCGGAGGAATGCCTTCCTTGTC 3970729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692573745283