Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20erecta_20[genbank_20GCA_5F001651985.1_202016-05-25] 57 sequences; 34,747,975 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq6 84.2 5e-11 >seq6 Length=723466 Score = 84.2 bits (92), Expect = 5e-11 Identities = 264/402 (66%), Gaps = 9/402 (2%) Strand=Plus/Plus Query 110607 GGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAACAGCG 110666 ||||| |||||| | | | ||| ||||| | | |||| | | |||||| | Sbjct 215678 GGAGGTATTGGTCTCAATGCCCATTGCATTCGTGCCACAGGATCCTACATCGCAGGCACC 215737 Query 110667 AAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATAT 110726 || ||| | || | ||| || | || ||| | | ||||||||| ||||||| || Sbjct 215738 AATGGTACCTCCAATGGCCTGATCCCTATGCTCCGTGTCTTCAACAACACTGCTCGTTAC 215797 Query 110727 GTGAATCAAGGTGGTAAGA---GAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCAT 110783 || ||||||| || || | | || | ||||| ||||||||||| || ||||| Sbjct 215798 GTCGATCAAGGCGGCAACAAGCGCCCAGGTGCCTTTGCCATCTATCTCGAGCCATGGCAC 215857 Query 110784 TCAGATATATTTGAATTCTTAGAACTTC-GTAAAAATCAAGGATTTGAAGAACAAAGAGC 110842 |||| | ||||| || || |||| || | || || || || ||||| ||||| Sbjct 215858 GCAGACGTGTTTGACTT-TTTGAACCTCAGGAAGAACCACGGCAAAGAAGAGGTCAGAGC 215916 Query 110843 ACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAA 110902 || || | || || || |||||| | | || | |||||| |||||| || |||| | Sbjct 215917 GCGGGACCTGTTCTACGCCCTGTGGACTCCCGACCTGTTCATGGAACGTG-TCGAGAAGA 215975 Query 110903 TGGCATG--TGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGGA 110960 || | ||| | || | ||||||||| | ||||| || |||| || || || Sbjct 215976 -ACCAAGAATGGACACTCTTCTGTCCTCATGAGGCACCTGGCCTCGCTGACGTCTACGGG 216034 Query 110961 AAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGC 111002 | ||||| | | || ||||| | |||||| || || ||| Sbjct 216035 GACGAGTTCAACGCGCTGTACGAGAGATATGAGAAGGAGGGC 216076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186811933255777