Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20erecta_20[genbank_20GCA_5F001651985.1_202016-05-25] 57 sequences; 34,747,975 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq6 113 6e-19 seq12 89.7 7e-12 >seq6 Length=723466 Score = 113 bits (124), Expect = 6e-19 Identities = 197/287 (69%), Gaps = 0/287 (0%) Strand=Plus/Plus Query 259895 ATGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGC 259954 ||||| ||| ||| |||||| || |||| || || || |||||||| || || | Sbjct 215519 ATGTCCCAGAAGTGCTTCACCCACGCTTCGCCGACTCTGTTCAATGCCGGGACACCTCAA 215578 Query 259955 CCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTAT 260014 || || || |||||||| || | || ||||| | || ||||||||||| || Sbjct 215579 CCCCAATTGTCATCGTGCTTCTTGATAGATATGAAAGAAGACAGCATCGAGGGCATTTAC 215638 Query 260015 GACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCA 260074 ||||| |||||| ||||| | ||||||||| | || || || || ||| | || Sbjct 215639 GACACCCTCAAGACCTGCGCCATGATCTCCAAGACAGCGGGAGGTATTGGTCTCAATGCC 215698 Query 260075 CACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTT 260134 || | || ||| | || ||||| | || |||||||| || ||||| ||||| Sbjct 215699 CATTGCATTCGTGCCACAGGATCCTACATCGCAGGCACCAATGGTACCTCCAATGGCCTG 215758 Query 260135 GTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCA 260181 | || ||||| || || || ||| |||| || || |||||||| || Sbjct 215759 ATCCCTATGCTCCGTGTCTTCAACAACACTGCTCGTTACGTCGATCA 215805 >seq12 Length=4193547 Score = 89.7 bits (98), Expect = 7e-12 Identities = 187/270 (69%), Gaps = 13/270 (5%) Strand=Plus/Minus Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 || ||||| |||||||| || | ||| || || || ||||||||||| ||||| || Sbjct 1495047 ATGGAAAATATCCACTCGGAGATGTACAGCCTTCTCATTGACACCTACGTGAAGGATCCC 1494988 Query 1456072 GTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCC 1456131 |||||| | | ||| |||| ||||||| | || | | | || || || Sbjct 1494987 AAAGAGAAGACGTATTTGTTTGACGCCGTCGACACAATCCCTTGTATCCGCAAGAAAGCG 1494928 Query 1456132 GACTGGGCGATGAAGTGGATC---AACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCG 1456188 |||||||| ||| |||||| |||| ||| |||| ||||||| | || |||| Sbjct 1494927 GACTGGGCTTTGAGATGGATCTCAGACAAAGAG----TCGA-GCTTTGCCCAACGACTCG 1494873 Query 1456189 TCGGCTTT-GCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGC-GCCATCTTTTG 1456245 | |||||| || || || || |||||||| ||||| || | | ||| | ||||| || Sbjct 1494872 T-GGCTTTCGCAGCTGTTGAAGGCATCTTCTTCTCTGG-ATCCTTTGCATCTATCTTCTG 1494815 Query 1456246 GCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 |||||||| || ||||||||||| || Sbjct 1494814 GCTCAAGAGCAAGGGACTCATGCCCGGCCT 1494785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177805702245234