Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20erecta_20[genbank_20GCA_5F001651985.1_202016-05-25] 57 sequences; 34,747,975 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq12 116 3e-21 seq6 86.0 5e-12 >seq12 Length=4193547 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| || || | |||| || | ||| | || || || |||||||| |||||||| | Sbjct 3448395 TGCCACCACGAAGACGCAGGACAAGATGGAGTGTGGATTCCTTTTGAATGTTGTAGTCAC 3448336 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 | | | || |||| || | ||| || || ||| |||| ||||| || || || || | Sbjct 3448335 TGAGCGTACGACCGTCCTCCAACTGCTTTCCAGCGAAAATCAGACGTTGCTGGTCGGGTG 3448276 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | |||||| || || ||||||| | || | | | || | ||||| | | ||||| Sbjct 3448275 GGATACCCTCCTTGTCTTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGCTCGATTCAA 3448216 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || ||||| || | ||||| |||||||| || |||||||||||||| Sbjct 3448215 CCTCCAGAGTAATCGTCTTGCCGGTCAGAGTCTTGACAAAGATTTGCAT 3448167 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || || || ||||||||||||| | || |||||||||| || || ||||| | Sbjct 3448129 TCCTTCTGGATGTTGTAGTCGCTCAGAGTTCGGCCGTCTTCGAGTTGCTTGCCGGCAAAG 3448070 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 ||||| ||||||||||| || || | ||||| || || ||||||| ||| | | Sbjct 3448069 ATGAGGCGCTGTTGATCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGATTTGACATTG 3448010 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | ||||| ||| || || || || || || | ||||| |||| ||| || ||| Sbjct 3448009 TCGATGGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCAGTCAAAGTCTTGACA 3447950 Query 27237 AAGATTTGCATAGCTGC 27253 || || ||||| ||||| Sbjct 3447949 AAAATCTGCATGGCTGC 3447933 >seq6 Length=723466 Score = 86.0 bits (94), Expect = 5e-12 Identities = 270/415 (65%), Gaps = 5/415 (1%) Strand=Plus/Minus Query 131638 GTTCTGTTCAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCT 131697 ||||| || || || | ||| |||| || || ||| | ||||| ||||| || | Sbjct 215977 GTTCTTCTCGACACGTTCCATGAACAGGTCGGGAGTCCACAGGGCGTAGAACAGGTCCCG 215918 Query 131698 AGCTTTTTTCTCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGC 131757 ||| | ||||||| | || | || | | || |||||||| || | ||| || Sbjct 215917 CGCTCTGACCTCTTCTTTGCCGTGGTTCTTCCTGAGGTTCAAAAAGTCAAACACGTCTGC 215858 Query 131758 ATGCCAGGGTTCCAAATACACTGCCATTGCGCCTTTGCGCTTA---CCGCCTTGATTAAC 131814 ||||| || || | ||| | || | || ||| |||||| |||||||||| || Sbjct 215857 GTGCCATGGCTCGAGATAGATGGCAAAGGCACCTGGGCGCTTGTTGCCGCCTTGATCGAC 215798 Query 131815 ATGACGAACCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATT 131874 | |||| | |||||||| | || || | ||| || || || |||| | | ||||| Sbjct 215797 GTAACGAGCAGTGTTGTTGAAGACACGGAGCATAGGGATCAGGCCATTGGAGGTACCATT 215738 Query 131875 GGTGCTCTTAATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCT-C 131933 ||||| |||||| || |||| | || || | ||||| ||||||||| | Sbjct 215737 GGTGCCTGCGATGTAGGATCCTGTGGCACGAATGCAATGGGCATTGAGACCAATACCTCC 215678 Query 131934 CGCCGTATTTAGAGATTAGTGCGCATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGT 131993 ||| || || ||||| | ||||| | | || |||| || || || || | ||||| Sbjct 215677 CGCTGT-CTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAAATGCCCTCGATGCTGT 215619 Query 131994 CCGCGGCAATGTCGACTAAAAAGCAAGAGGACAACTGTTGGTGAAATGTGCCGGC 132048 | | || || | || ||||| || ||||| || | ||| ||| ||||| Sbjct 215618 CTTCTTTCATATCTATCAAGAAGCACGATGACAATTGGGGTTGAGGTGTCCCGGC 215564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934104803384