Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20erecta_20[genbank_20GCA_5F001651985.1_202016-05-25] 57 sequences; 34,747,975 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq6 147 3e-30 seq12 91.5 2e-13 seq56 82.4 1e-10 >seq6 Length=723466 Score = 147 bits (162), Expect = 3e-30 Identities = 552/850 (65%), Gaps = 27/850 (3%) Strand=Plus/Minus Query 111242 GATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACAT 111301 || ||||||||||| ||||| |||||| | | ||||| || | ||| || || || Sbjct 216285 GAGGCCAAATTGCACACAGCGACCTCATCGGGAGCCGTGTATTCGACAATCTCAGTGCAA 216226 Query 111302 AAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCC 111361 | ||||| || || || ||||| ||||| ||||| ||||| |||||| |||||| Sbjct 216225 AGATTGGAGCTTCGGATGGTACCCAAGTTCTTCTGGTTGCTCTTTCGGTTGCAAGCATCC 216166 Query 111362 TTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AAC 111420 ||||||||||||||||| || || || || ||||||| | ||| || || | ||| | | Sbjct 216165 TTGTAGAGCATGTAGGGGGTACCGGTTTCAGTCTGTGCCTCGAGGATGGCATACCATAGC 216106 Query 111421 ATCGGCGGCTGGTAC--AATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGG 111478 || ||| || | || ||||| | || |||||| ||| || | ||| || Sbjct 216105 TTCTGCGCCTTG-ACGGTCTGGCG--ACCACGGCCCTCCTTCTCATATCTCTCGTACAGC 216049 Query 111479 GCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGA 111538 || | ||||| || || |||| | ||| || ||||||| | |||||||| || Sbjct 216048 GCGTTGAACTCGTCCCCGTAGACGTCAGCGAGGCCAGGTGCCTCATGAGGACAGAAGAGT 215989 Query 111539 GACCATTGACCACCTTC--CTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATG 111596 | ||||| | ||| ||| || || | |||||| ||||| ||| ||||||||| Sbjct 215988 GTCCATT--CTTGGTTCTTCTCGACACGTTCCATGAACAGGTCGGGAGTCCACAGGGCGT 215931 Query 111597 AAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA--CTCAAGGA 111653 | || || || | | | || ||||||| | || ||||| || | | |||| | Sbjct 215930 AGAACAGGTCCCGCGCTCTGA-CCTCTTCTTTGCCGTGGTT-CTTCCTGAGGTTCAA-AA 215874 Query 111654 ACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC- 111712 | || | | || |||||||||||||| ||||||| || | | || | | ||| Sbjct 215873 AGTCAAACACGTCTGCGTGCCATGGCTCGAGATAGATGGCAAAGGCACC---TGGGCGCT 215817 Query 111713 -----CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAA 111767 || |||||| || || || || ||| ||| || || || ||||| || || | Sbjct 215816 TGTTGCCGCCTTGATCGACGTAACGAGCAGTGTTGTTGAAGACACGGAGCATAGGGATCA 215757 Query 111768 TACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGA 111827 |||| || |||||| || || || ||| |||| | | |||| Sbjct 215756 GGCCATTGGAGGTACCATTGGTGCCTGCGATGTAGGATCCTGTGGCACGAATGCAATGGG 215697 Query 111828 TGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCAT 111887 | | |||||||| || || ||| ||||| || || | | || || | | Sbjct 215696 CATTGAGACCAATACCTCCCGCTGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGT 215637 Query 111888 AGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTC 111947 | || || | ||| ||| || || | | || | |||||| |||| || ||| Sbjct 215636 AAATGCCCTCGATGCTGTCTTCTTTCATATCTATCAAGAAGCACGATGACAATTGGGGTT 215577 Query 111948 TTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA-CATACCTTGGGACATC 112006 ||||| || |||||||| || || || | ||||| |||| || | |||||||| Sbjct 215576 GAGGTGTCCCGGCATTGAACAGAGTCGGCGAAGCGTGGGTGAAGCACTTC-TGGGACATA 215518 Query 112007 TTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGC 112066 | ||| ||||| | | | |||| || || ||||||||||| | || || ||| Sbjct 215517 AGATTGTACGTCTCGATGGCCTTTTCAACATCATCTCCGTGGATGCCCACCGCCACACGC 215458 Query 112067 ATGAACATGT 112076 || | ||||| Sbjct 215457 ATCAGCATGT 215448 >seq12 Length=4193547 Score = 91.5 bits (100), Expect = 2e-13 Identities = 193/283 (68%), Gaps = 4/283 (1%) Strand=Plus/Plus Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 ||||| ||| ||| | ||||||||| || || || || || || |||||| || || Sbjct 1494731 GCAAAATCCGTGTGCATACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTGAGGCCG 1494790 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGAT 122777 |||||||| ||| |||| | ||| | |||| ||| || || || ||||||||||| Sbjct 1494791 GGCATGAGTCCCTTGCTCTTGAGCCAGAAGATAGATGCA-AAGGATCCAGAGAAGAAGAT 1494849 Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCA-A 122836 || || ||| || || || | || |||| ||| || | ||| ||||| | | | Sbjct 1494850 GCCTTCAACAGCTGCGAAAGCCACGAGTCGTTGGGC-AAAGCTCGACTCTTTGTCTGAGA 1494908 Query 122837 ACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAA 122896 |||| ||| ||||| | ||| ||||| ||||| || | || | || ||| |||| Sbjct 1494909 TCCATCTCAAAGCCCAGTCCGCTTTCTTGCGGATACAAGGGATTGTGTCGACGGCGTCAA 1494968 Query 122897 ATAACTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAAT 122939 | || | | |||| || |||||| | ||| ||||||| Sbjct 1494969 ACAAATACGTCTTCTCTTTGGGATCCTTCACGTAGGTGTCAAT 1495011 >seq56 Length=1575404 Score = 82.4 bits (90), Expect = 1e-10 Identities = 160/234 (68%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 11621 TTGCCCACCGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATT 11680 ||||| | ||||| || || |||||||||| || || || ||| | ||||| | Sbjct 571014 TTGCCAATGGCATCGATTTCGTCAATGAAGATGATGCACGGCGCATTCTTTCGGGCATTG 571073 Query 11681 TCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCG 11740 | || |||||||| || | || ||| ||||| |||||||| || || || | | | Sbjct 571074 GCGAACAGATCGCGCACTCGAGAGGGACCGACACCGACAAACATTTCGACGAATTCGGAG 571133 Query 11741 GCAGAGCACTG-GATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGT 11799 | ||| || | || ||| || ||| |||||||| || | || ||| | | ||| Sbjct 571134 CCGGAG-ACAGAGAAGAAGGGAACACCAGATTCACCAGCAGTCGCCTTGGCCAACAAGGT 571192 Query 11800 CTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC 11853 ||| || ||||| || ||| | |||| ||| || ||||||||||| || || Sbjct 571193 CTTACCAGTACCCGGAGGACCAGACAGAATGGCCCCCCGGGGGATCTTTGCGCC 571246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031552527200