Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20erecta_20[genbank_20GCA_5F001651985.1_202016-05-25] 57 sequences; 34,747,975 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq1 262 1e-64 seq5 154 4e-32 seq12 109 2e-18 >seq1 Length=4892217 Score = 262 bits (290), Expect = 1e-64 Identities = 499/732 (68%), Gaps = 11/732 (2%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || || || |||||| |||||||||| || || ||||| | || | | | || || Sbjct 1718325 GCCATTGGTATCGATCTAGGTACTACCTACTCATGTGTAGGCGTCTTCCGGGACGACCGC 1718266 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 | || || || || || || || || ||| |||| || || || | |||||| || ||| Sbjct 1718265 ATCGAGATTATCGCCAACGACCAGGGCAACCGAACCACTCCCTCGTTCGTTGCTTTCACC 1718206 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || |||||| ||||||| ||| | ||||| ||||||| || || || | || Sbjct 1718205 GACACAGAGCGTCTGATTGGCGATGCCGCAAAGAATCAAGTCGCCATGAACCCCCACAAC 1718146 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC----AAATCTACACA 349434 || || ||||| || || ||||| ||||| | | || ||| || || || Sbjct 1718145 ACCGTCTTTGACGCGAAACGACTGATTGGCCGGAAATTCAGCGACCCTGAAGTC----CA 1718090 Query 349435 ATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTAT 349494 | | ||| | |||||||| || |||| || | | | ||| |||| || || | || Sbjct 1718089 AGCCGATATGAAACATTTCCCCTTTAAGGTCAT-CGACAAG--GGTGGCAAGCCGGTCAT 1718033 Query 349495 TGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGT 349554 |||| || | ||||||||| | || || || ||||||||| || || || ||||| Sbjct 1718032 CCAGGTGGAGTTCAAAGGTGAAGAGAAGCAGTTCACACCCGAAGAGATCTCGTCCATGGT 1717973 Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614 || || |||| ||| | ||| || |||| | |||| ||||| | | ||||| Sbjct 1717972 CTTGACCAAGATGAGGGAGACTGCGGAGTCATACCTCGGTGGCACAGTCAACAACGCTGT 1717913 Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674 ||||| || || || || || || || | |||||| || || || || ||||| Sbjct 1717912 CATTACCGTCCCTGCATACTTCAACGACTCTCAGCGTCAAGCCACCAAGGACGCTGGTCT 1717853 Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734 || || || | ||||| || | || || || |||||||| ||||| || ||||| || Sbjct 1717852 GATCGCAGGCCTCAATGTGCTCCGTATCATCAACGAACCCACCGCTGCTGCCATTGCCTA 1717793 Query 349735 TGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794 || ||||| || | | || || ||| | || || || || | |||||||| Sbjct 1717792 CGGTCTTGACAAGAAGGCCGAGGGCGAGCGCAATGTCCTCATCTTCGACCTGGGTGGTGG 1717733 Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGC 349854 |||||| ||||| || || || || |||||||||| || || ||||| || | ||||| Sbjct 1717732 TACTTTCGATGTGTCTCTCCTGACCATTGAAGAGGGTATCTTCGAAGTCAAGTCCACTGC 1717673 Query 349855 TGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAA 349914 || || || || || ||||| ||||||||||| |||||||| || || || ||||| Sbjct 1717672 CGGCGACACTCACCTGGGTGGTGAAGATTTTGACAATCGTCTTGTCAACCACTTCGTTAA 1717613 Query 349915 AGAATTTAAGCG 349926 ||||| || || Sbjct 1717612 CGAATTCAAACG 1717601 >seq5 Length=1165522 Score = 154 bits (170), Expect = 4e-32 Identities = 248/356 (70%), Gaps = 3/356 (1%) Strand=Plus/Minus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 || |||||||| || | ||| || | | || ||||||||| |||| || ||||| || Sbjct 1084384 CCTGAAGAAATCTCTGCCATGATTCTGGGCAAGATGAAGGAAGTTGCGGAGGCATACCTA 1084325 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 || | | ||| || | || ||| | || || || || || || || || || ||||| Sbjct 1084324 GGCAAGAAAGTCACCCACGCAGTTGTCACGGTCCCGGCATACTTCAACGACGCTCAGCGA 1084265 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 || || ||||||||||||| || || || || | |||||| | | | || || Sbjct 1084264 CAGGCCACCAAAGATGCTGGCACTATCGCTGGCTTGACTGTTCTGCGTGTTGTCAACGAG 1084205 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATT 349771 |||||||| ||||| || || || || ||||| || || | | |||| | | ||| Sbjct 1084204 CCCACTGCCGCAGCTATCGCTTACGGCCTTGACAA---GAAAGGCAAAGAGAGCCAGATT 1084148 Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831 | | | ||| | ||||| |||||||||||||| || || | || ||||||| || Sbjct 1084147 ATCGTCTACGATCTCGGTGGCGGTACTTTTGATGTTTCCCTTTTGTCAATTGAAGACGGT 1084088 Query 349832 ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGA 349887 |||| || || || || || |||||||| ||||||||||| |||||||| || Sbjct 1084087 GTTTTCGAGGTCTTGGCCACCGCCGGTGATACCCATCTTGGTGGCGAAGATTTCGA 1084032 Score = 93.3 bits (102), Expect = 1e-13 Identities = 323/497 (65%), Gaps = 18/497 (4%) Strand=Plus/Minus Query 350132 CCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATC--AGATTGATGAAGTAG 350189 || || ||| | || || ||||| || || ||| | ||||| |||||||||| | | Sbjct 1083787 CCGGTAGAACAGGTTTTGAAAGACGCCAAG--GTCAAGAAATCTGAGATTGATGACATCG 1083730 Query 350190 TTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACT-ATCT--GAGTTTT 350246 | | | |||||||| || ||||| || || ||||| || | | ||| ||||| | Sbjct 1083729 TCCTTATCGGTGGTTCAACCCGTATCCCCAAGGTTCA---GTCAATGATCGAGGAGTTCT 1083673 Query 350247 TTAATGGCAAAGAA-CCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCT 350305 || ||||||| | || | || | | || ||||| ||||| || |||||||| || Sbjct 1083672 TTGGTGGCAAAAAGGCCAGCAAGGGTA-TCAACCCAGACGAAGCCGTCGCATATGGCGCC 1083614 Query 350306 GCTGTTCAGGCATCTATTTTATCTGGAAATAAGAGTTCTAAAATTGATGATCTATTACTA 350365 || ||||||| | || | ||||| | | || || || || || |||| Sbjct 1083613 GCCGTTCAGGGTGGTGTTCTTTCTGGCGAAA------CTGGAACGGAAGACCTCATACTC 1083560 Query 350366 CTAGATGTAACTCCACTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTT 350425 | ||||| | || ||| | || || | || || | |||| ||| ||||| || Sbjct 1083559 ATGGATGTCAACCCTCTTACTCTCGGCATTGAGACCACCGGTGGAGTCATGACCAAACTC 1083500 Query 350426 ATTCCTAGAAATAGTACTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGAT 350485 ||||| |||| | ||||| || || || || |||| ||| || || || || Sbjct 1083499 ATTCCGCGAAACACCCTGGTACCGACCAAGAAATCTCAAATTTTCTCGACGGCCGCGGAC 1083440 Query 350486 AATCAGCCAGCGGTAACAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAAT 350545 || ||||| | ||| || || || || ||||| ||||| || ||||| || || Sbjct 1083439 AACCAGCCCGTGGTGCTTATCCAGGTTTTCGAAGGCGAACGAGCAATGACTAAGGACAAC 1083380 Query 350546 AATAAACTTGGAGAATTTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAG 350605 || | || ||||| || | | ||||| || ||| | || ||||||||| Sbjct 1083379 AACCTTTTGGGCAAATTTGAACTCACCGGTATTCCTCCTGCCCCTCGTGGTGTTCCTCAG 1083320 Query 350606 ATTGAAGTCTCTTTCGA 350622 |||||||| || ||||| Sbjct 1083319 ATTGAAGTGTCGTTCGA 1083303 >seq12 Length=4193547 Score = 109 bits (120), Expect = 2e-18 Identities = 173/244 (71%), Gaps = 3/244 (1%) Strand=Plus/Minus Query 140495 ACTAATATTTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTG 140554 || ||||||| ||| |||||||| | | || |||||||| || || || || ||||| Sbjct 3448408 ACAAATATTTG-CATGCCACCACGAAGACGCAGGACAAGATGGAGTGTGGATTCCTTTTG 3448350 Query 140555 AATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACG 140614 ||| || || ||| | || || || || || | || |||||||| || || ||||| Sbjct 3448349 AATGTTGTAGTCACTGAGCGTACGACCGTCCTCCAACTGCTTTCCAGCGAAAATCAGACG 3448290 Query 140615 TTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCG 140673 |||||| || || || || || || || || || || || ||| || || || || || | Sbjct 3448289 TTGCTGGTCGGGTGGGATACCCTCCTTGTCTTGGATCTT-GCTCTTGACGTTGTCGATGG 3448231 Query 140674 AATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCT 140733 || | |||||| || || |||| ||||| ||||| || || || ||||| || | Sbjct 3448230 TGTCGCTCGATTCAACCTCCAGAGTAATCGTCTTGCCGGTCAGAGTCTTGACAAAGATTT 3448171 Query 140734 GCAT 140737 |||| Sbjct 3448170 GCAT 3448167 Score = 107 bits (118), Expect = 6e-18 Identities = 167/236 (71%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||| || ||||| | | || || ||||| ||||| ||| || || || || | Sbjct 3448173 TTTGCATGCCTCCACGGAGACGGAGGACGAGATGCAGAGTGCTCTCCTTCTGGATGTTGT 3448114 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || | ||||| || ||||| ||||| || || |||||||| || || || |||| Sbjct 3448113 AGTCGCTCAGAGTTCGGCCGTCTTCGAGTTGCTTGCCGGCAAAGATGAGGCGCTGTTGAT 3448054 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | || ||||| || || || ||||| || || | ||| ||||| || || | || | || Sbjct 3448053 CGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGATTTGACATTGTCGATGGTGTC-GCTG 3447995 Query 140683 GT-TCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || ||||| || | ||||| || || | || || |||||||||||||| Sbjct 3447994 GACTCGACCTCAAGGGTGATGGTCTTGCCAGTCAAAGTCTTGACAAAAATCTGCAT 3447939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515253293390771