Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20erecta_20[genbank_20GCA_5F001651985.1_202016-05-25] 57 sequences; 34,747,975 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq6 221 1e-52 seq57 167 3e-36 >seq6 Length=723466 Score = 221 bits (244), Expect = 1e-52 Identities = 471/698 (67%), Gaps = 4/698 (1%) Strand=Plus/Plus Query 53243 GAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAAC 53302 ||||||||| | | ||| ||| |||| ||| || ||||| |||| || |||||||| Sbjct 215504 GAGACGTACAATCTTATGTCCCAGAAGTGCTTCACCCACGCTTCGCCGACTCTGTTCAAT 215563 Query 53303 GCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCG 53362 || || || ||| || || |||| |||||| || | | ||||| || ||| Sbjct 215564 GCCGGGACACCTCAACCCCAATTGTCATCGTGCTTCTTGATAGATATGAAAGAAGACAGC 215623 Query 53363 ATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGT 53422 ||||| ||||| ||||| || |||||| || ||| ||||||||| |||| ||| Sbjct 215624 ATCGAGGGCATTTACGACACCCTCAAGACCTGCGCCATGATCTCCAAGACAGCGGGAGGT 215683 Query 53423 ATCGGTATCCACTGCTCGAA-CGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGG 53481 || ||| || | ||| | | | ||||| | || | ||| || || || || Sbjct 215684 ATTGGTCTCAA-TGCCCATTGCATTCGTGCCACAGGATCCTACATCGCAGGCACCAATGG 215742 Query 53482 CGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAA 53541 | || |||| | | ||||||||||| |||||||||||||| || || |||||| | Sbjct 215743 TACCTCCAATGGCCTGATCCCTATGCTCCGTGTCTTCAACAACACTGCTCGTTACGTCGA 215802 Query 53542 CCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGA 53601 || || || |||||| || | || |||||||| |||||||| |||||||| || Sbjct 215803 TCAAGGCGGCAACAAGCGCCCAGGTGCCTTTGCCATCTATCTCGAGCCATGGCACGCAGA 215862 Query 53602 CATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGA 53661 | | | || ||| | | || | ||| || || | |||||| | | || || Sbjct 215863 CGTGTTTGACTTTTTGAACCTCAGGAAGAACCACGGCAAAGAAGAGGTCAGAGCGCGGGA 215922 Query 53662 CCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGG 53720 |||||| ||| || ||||||| ||| ||||| |||||| || || |||||| || | | Sbjct 215923 CCTGTTCTAC-GCCCTGTGGACTCCCGACCTGTTCATGGAACGTGTCGAGAAGAACCAAG 215981 Query 53721 AGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGT 53780 | ||| || | || || | ||| || |||||| | |||||||| || |||| Sbjct 215982 AATGGACACTCTTCTGTCCTCATGAGGCACCTGGCCTCGCTGACGTCTACGGGGACGAGT 216041 Query 53781 TTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGC 53840 | |||| | |||| || || | ||||||| ||| |||||||||| Sbjct 216042 TCAACGCGCTGTACGAGAGATATGAGAAGGAGGGCCGTGGTCGCCAGACCGTCAAGGCGC 216101 Query 53841 GTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCT 53900 || ||||| |||| |||||| || ||| || || || || || |||||| || Sbjct 216102 AGAAGCTATGGTATGCCATCCTCGAGGCACAGACTGAAACCGGTACCCCCTACATGCTCT 216161 Query 53901 ACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938 |||||||| | |||| |||||||||||||||||| Sbjct 216162 ACAAGGATGCTTGCAACCGAAAGAGCAACCAGAAGAAC 216199 >seq57 Length=1485091 Score = 167 bits (184), Expect = 3e-36 Identities = 293/423 (69%), Gaps = 3/423 (1%) Strand=Plus/Minus Query 117149 AACCCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAG 117208 ||||| || || ||||| || |||||||| | || | ||| || ||||| || ||||| Sbjct 1108001 AACCC-GTGCCAATACCATCGGCACCATTGACGAGGACCATTGGGACGACCGGTACGTAC 1107943 Query 117209 AACTCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCA-CT 117267 | ||||||||| | || | |||| || | ||| | || | || | || || Sbjct 1107942 ACCTCAGGCTCAATCTTCTTGTCGTCATCATAGTTGTAGGTCAGAAGCGGTTCATCGGCT 1107883 Query 117268 CGGATCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGC 117327 || | ||| | ||| | | | || | ||| |||||||||||||| |||| |||||| Sbjct 1107882 TGG-TGGAACAACTTCCTTGCGAAGGGCGATAGACGAGTGAAAATGTATCGAGCGCTTGC 1107824 Query 117328 AGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAG 117387 || ||| |||| || || ||||| ||||| || |||||||| | ||||| Sbjct 1107823 AGAATCACTGCCGCCCTGGTTCCGAGTACCAAATTGGCCGGAGGGCTCCAACAAGTTCAC 1107764 Query 117388 GTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTC 117447 ||||| | || ||||||||||| ||||| ||||||||| || || | || Sbjct 1107763 ATTGTTCGATCCGACAAAGTTTTGTGCCAACCCGACAATCGTCTGCTGCAGTGAGGTTTC 1107704 Query 117448 ACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTC 117507 ||||||||| ||||||||| | | || |||||||||| ||| |||||||| || Sbjct 1107703 ACCATGGTGGTACGCCGTCATACCACCGACCAGACCCGCCAGCTCAGCGACCTTCATATC 1107644 Query 117508 TGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACC 117567 ||||||| ||||| ||| ||||| || || || ||||||| |||||||| || Sbjct 1107643 CTTTTTCAGGTTGCGCTTGAAGCATGCATACATGACTTTCCGCTGACCAGGCTTCAGGCC 1107584 Query 117568 ATC 117570 ||| Sbjct 1107583 ATC 1107581 Score = 91.5 bits (100), Expect = 2e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 153832 AATTTTGAACTGAAAACGTTAGCCAACTTGGCACCGTAACCATTGCGACCGCCCGTCACG 153891 |||| || ||||||| ||| |||| ||| |||||||| || || | |||||||| | Sbjct 1105971 AATTCTGTGCTGAAAATGTTGGCCAGCTTTGCACCGTAGCCGTTCCTGCCGCCCGTAATC 1105912 Query 153892 CGTTGTTCCTCGTCGTTGTAGTTGGAGCTGGTCAAAAGGTGCCCAAAGATGAGTTCAGGG 153951 |||||||||||| | ||| || |||| |||||| ||||| ||||| || | || ||| Sbjct 1105911 TTTTGTTCCTCGTCATCGTAATTTGAGCCGGTCAAGAGGTGGCCAAAAATCATCTCCGGG 1105852 Query 153952 ATCCAGAT 153959 || |||| Sbjct 1105851 ATGTAGAT 1105844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215610108600