Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20erecta_20[genbank_20GCA_5F001651985.1_202016-05-25] 57 sequences; 34,747,975 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq12 143 6e-29 seq45 120 7e-22 seq20 114 3e-20 seq1 107 5e-18 >seq12 Length=4193547 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||||||||| ||||| |||||||| ||||| | ||||| || | || Sbjct 3448388 ACGAAGACGCAGGACAAGATGGAGTGTGGATTCCTTTTGAATGTTGTAGTCACTGAGCGT 3448329 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || | |||||| |||||||| || || ||||| |||||||| || ||||| Sbjct 3448328 ACGACCGTCCTCCAACTGCTTTCCAGCGAAAATCAGACGTTGCTGGTCGGGTGGGATACC 3448269 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||||||||| ||| || ||||||||||| | ||| || || | Sbjct 3448268 CTCCTTGTCTTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGCTCGATTCAACCTCCAG 3448209 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || ||||||||||| |||| ||| || | || | |||||| Sbjct 3448208 AGTAATCGTCTTGCCGGTCAGAGTCTTGACAAAGATTTGCAT 3448167 Score = 125 bits (138), Expect = 2e-23 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| || || |||||| || || |||| ||||| ||| || ||||| || ||| Sbjct 3448150 AGGACGAGATGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTTCGGCCGTCT 3448091 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| || || ||||| || || ||||| ||||| ||||| || |||||||| Sbjct 3448090 TCGAGTTGCTTGCCGGCAAAGATGAGGCGCTGTTGATCGGGGGGAATGCCCTCCTTGTCC 3448031 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| || ||| ||||||||||| || || || || | ||||| ||| Sbjct 3448030 TGGATCTTGGATTTGACATTGTCGATGGTGTCGCTGGACTCGACCTCAAGGGTGATGGTC 3447971 Query 225682 TTGCCCGTCAAAGTTTT 225698 ||||| |||||||| || Sbjct 3447970 TTGCCAGTCAAAGTCTT 3447954 >seq45 Length=2675113 Score = 120 bits (132), Expect = 7e-22 Identities = 125/164 (76%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| ||| || ||| | |||||||| |||||||| || |||||||| Sbjct 831387 TTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCTTCGAGCTGCTTGCCGGCGAAGATC 831446 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 | || || ||||||||||| || |||||||||||||||||||| ||| || ||| Sbjct 831447 AAGCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCG 831506 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 || ||||| || | || || || | ||||| ||||||||||| Sbjct 831507 ATCGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGT 831550 >seq20 Length=25804 Score = 114 bits (126), Expect = 3e-20 Identities = 187/269 (70%), Gaps = 3/269 (1%) Strand=Plus/Minus Query 7445 TATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATTATAA 7504 |||||||||| |||| | || || ||| | |||||| |||||| || | |||| Sbjct 13125 TATATTTAATGTTTGCAGTATTCTCAGGTTTAGCAGGTACAGCATTTTCAGTGTTAATAA 13066 Query 7505 GGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTACAACG 7564 | ||||||||| | | || || ||| | | | |||| ||| | || || Sbjct 13065 GATTAGAATTATCAGGACCAGGAGTACAATTTATAGCAGATAAT---CAATTATATAATA 13009 Query 7565 TTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAG 7624 ||| || || || ||||| | || |||||||||||| | |||||||| | | |||| Sbjct 13008 GTATAATAACAGCACATGCTATAGTGATGATTTTCTTTATGGTTATGCCAGCCTTAATAG 12949 Query 7625 GCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAA 7684 | ||||| || |||| || | || |||||||| || | ||| |||||||| || || | Sbjct 12948 GTGGTTTTGGTAATTTCTTATTACCATTAATGATAGGAGGTCCAGATATGGCATTCCCTA 12889 Query 7685 GGCTTAACAATATAAGTTTTTGATTACTA 7713 | | || ||||||||||| |||||| || Sbjct 12888 GATTAAATAATATAAGTTTCTGATTATTA 12860 Score = 93.3 bits (102), Expect = 1e-13 Identities = 84/103 (82%), Gaps = 2/103 (2%) Strand=Plus/Plus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 ||| ||||||||||| |||||||| | |||||| || | |||||||| || || |||| Sbjct 12449 TTCTGGATGACCAAAGAATCAGAAAAGATGTTGGTATAATATAGGATCTCCACCTCCTGC 12508 Query 370732 TGGATCAAA-AAAGCTAGTATTAAAATTTCTATCAGTTAAAAC 370773 | ||||| |||| | ||||||||||||||||| |||||||| Sbjct 12509 TACTTCAAAGAAAGAT-GTATTAAAATTTCTATCTGTTAAAAC 12550 >seq1 Length=4892217 Score = 107 bits (118), Expect = 5e-18 Identities = 101/129 (78%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || || | || ||| |||||||| |||||||| || |||| ||||| |||| | || Sbjct 3970602 CGGAGGCGCAAGACGAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGCGTG 3970661 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | |||||||| || ||||| || |||||||| || ||||| ||||| || ||||| ||| Sbjct 3970662 CGGCCATCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCCGGAGGAATGCCT 3970721 Query 225613 TCCTTGTCT 225621 ||||||||| Sbjct 3970722 TCCTTGTCT 3970730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192530329079558