Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20erecta_20[genbank_20GCA_5F001651985.1_202016-05-25] 57 sequences; 34,747,975 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq12 127 1e-24 seq45 102 6e-17 >seq12 Length=4193547 Score = 127 bits (140), Expect = 1e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || | |||||||||||||| ||||| || |||||||| ||||||||||| || | Sbjct 3448621 CCACCACGCAGTCTCAACACCAAATGAAGAGTACTCTCCTTCTGGATGTTGTAGTCTGAC 3448562 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 ||| || | || |||| |||||| |||||||||||||| | |||||| || | || Sbjct 3448561 AGTGTTCGGCCATCCTCCAACTGCTTACCGGCAAAGATCAATCTCTGCTGGTCCGGTGGA 3448502 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | || ||||| ||| |||||| ||| | | | || || || | | || ||| Sbjct 3448501 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATCGTATCTGAGCTCTCTACC 3448442 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || | ||| || |||||||| || || || || || || ||||||||| Sbjct 3448441 TCGAGCGTGATTGTCTTTCCAGTCAGAGTTTTGACAAATATTTGCATG 3448394 Score = 111 bits (122), Expect = 1e-19 Identities = 168/238 (71%), Gaps = 1/238 (0%) Strand=Plus/Minus Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 ||||| ||| || || | || | || || || || || ||| |||||||| ||||| Sbjct 3448403 TATTTGCATGCCACCACGAAGACGCAGGACAAGATGGAGTGTGGATTCCTTTTGAATGTT 3448344 Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220 ||| || ||| || |||| |||| |||||| || || || |||| ||| ||||| Sbjct 3448343 GTAGTCACTGAGCGTACGACCGTCCTCCAACTGCTTTCCAGCGAAAATCAGACGTTGCTG 3448284 Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGC 44280 || | || | ||| ||||| || ||||| ||| | | | ||||||||| Sbjct 3448283 GTCGGGTGGGATACCCTCCTTGTCTTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGCT 3448224 Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||| ||||||| ||||||||||| || || || ||||| || |||||||||||| Sbjct 3448223 CGATTCAACCTCCAGAGTAATCGTCTTGCCGGTCAGAGTCTTGACAAAGATTTGCATG 3448166 Score = 100 bits (110), Expect = 2e-16 Identities = 154/214 (72%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC--GAGTTGGCGCTCGTCGT 44186 || || || || ||||||||||| ||||||||||| ||| ||||| | || |||| | Sbjct 3448147 ACGAGATGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTTCG-GC-CGTCTT 3448090 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 | || ||||| ||||||||||| | ||||| ||||| | || | || ||||| ||| Sbjct 3448089 CGAGTTGCTTGCCGGCAAAGATGAGGCGCTGTTGATCGGGGGGAATGCCCTCCTTGTCCT 3448030 Query 44247 TTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 ||||| || || ||| | ||||||||| ||| || ||||| | || || || Sbjct 3448029 GGATCTTGGATTTGACATTGT--CGATGGTGTCGCTGGACTCGACCTCAAGGGTGATGGT 3447972 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||| || || | ||||| || || || |||||| Sbjct 3447971 CTTGCCAGTCAAAGTCTTGACAAAAATCTGCATG 3447938 >seq45 Length=2675113 Score = 102 bits (112), Expect = 6e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 44136 GAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCT 44195 |||||||| |||| ||||||||||| ||| || || | || || ||||||| Sbjct 831373 GAAGCGTGTGTACCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCTTCGAGCTGCT 831432 Query 44196 TCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCT 44255 | ||||| |||||||| |||||||| || | || | |||||||| || ||||| Sbjct 831433 TGCCGGCGAAGATCAAGCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTTGG 831492 Query 44256 GCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGA 44315 ||| | | | || ||||||| || || ||||| | || || ||||| ||||||| Sbjct 831493 ACTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGA 831552 Query 44316 GGGTCTTCACGAAG 44329 ||||||| |||||| Sbjct 831553 GGGTCTTGACGAAG 831566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990149919169