Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20erecta_20[genbank_20GCA_5F001651985.1_202016-05-25] 57 sequences; 34,747,975 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq12 149 2e-30 seq45 134 3e-26 seq1 105 2e-17 >seq12 Length=4193547 Score = 149 bits (164), Expect = 2e-30 Identities = 162/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || |||||||| || ||||| || ||||| |||||||| || |||||||| Sbjct 3448398 CAAATATTTGTCAAAACTCTGACTGGAAAGACAATCACGCTCGAGGTAGAGAGCTCAGAT 3448457 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||||||||||| || || || || ||||||||||| Sbjct 3448458 ACGATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCACCGGACCAGCAG 3448517 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| ||||| || ||| | || ||||| | || || | || || ||| || Sbjct 3448518 AGATTGATCTTTGCCGGTAAGCAGTTGGAGGATGGCCGAACACTGTCAGACTACAACATC 3448577 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 || || || || || ||| | || |||||||| Sbjct 3448578 CAGAAGGAGAGTACTCTTCATTTGGTGTTGAGACT 3448612 Score = 131 bits (144), Expect = 4e-25 Identities = 155/209 (74%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 ||||| || || || ||||| || || || ||||| || || ||||| ||| ||| Sbjct 3448170 CAAATCTTTGTCAAGACTCTGACCGGCAAGACGATTACTCTGGAGGTTGAATCGAGC--- 3448226 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||||||||| |||||||| ||||| || ||||| || || ||||| || |||||| Sbjct 3448227 GACACCATCGACAACGTCAAGAGCAAGATCCAAGACAAGGAGGGTATCCCACCCGACCAG 3448286 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 ||||| || || ||||| ||||| ||| | || || || | || || || || ||| Sbjct 3448287 CAACGTCTGATTTTCGCTGGAAAGCAGTTGGAGGACGGTCGTACGCTCAGTGACTACAAC 3448346 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129 | ||||| ||||| ||||| |||||||| Sbjct 3448347 ATTCAAAAGGAATCCACACTCCATCTTGT 3448375 Score = 114 bits (126), Expect = 3e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || || ||| | || || || || |||||||| ||||| || | ||| Sbjct 3447942 CAGATTTTTGTCAAGACTTTGACTGGCAAGACCATCACCCTTGAGGTCGAGTCCAGCGAC 3448001 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || |||||| ||||| |||||||| || || || || || || || || Sbjct 3448002 ACCATCGACAATGTCAAATCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGATCAACAG 3448061 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| ||||| || || |||||||| || | ||||| ||| || ||| || Sbjct 3448062 CGCCTCATCTTTGCCGGCAAGCAACTCGAAGACGGCCGAACTCTGAGCGACTACAACATC 3448121 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || |||||||| || Sbjct 3448122 CAGAAGGAGAGCACTCTGCATCTCGT 3448147 >seq45 Length=2675113 Score = 134 bits (148), Expect = 3e-26 Identities = 137/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 ||||| || || ||||| || || || |||||||| ||||| || || ||||| ||| Sbjct 831565 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGACACGATC 831506 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || |||||||| ||||| || ||||| ||||| ||||| || |||||||| || | Sbjct 831505 GACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGCATCCCGCCCGACCAGCAGCGCTTG 831446 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 ||||||||||| || |||||||||||||| | ||||| ||| || ||| |||| || Sbjct 831445 ATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGTACTCTGAGCGACTACAACATCCAGAA 831387 >seq1 Length=4892217 Score = 105 bits (116), Expect = 2e-17 Identities = 99/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073 ||||| ||||| || ||||||||||||||||| || ||||||||||| || || |||||| Sbjct 3970729 GACAAGGAAGGCATTCCTCCGGACCAGCAACGCCTGATCTTCGCCGGCAAGCAACTCGAA 3970670 Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTG 178133 ||||| | || || |||| || ||| |||| || ||||| || || || || || ||| Sbjct 3970669 GATGGCCGCACGCTCTCCGACTACAACATCCAGAAGGAATCCACCCTCCACCTCGTCTTG 3970610 Query 178134 AGACTC 178139 | ||| Sbjct 3970609 CGCCTC 3970604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730320900058