Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20erecta_20[genbank_20GCA_5F001651985.1_202016-05-25] 57 sequences; 34,747,975 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq12 156 4e-33 seq1 116 3e-21 seq45 100 3e-16 seq5 87.8 2e-12 >seq12 Length=4193547 Score = 156 bits (172), Expect = 4e-33 Identities = 174/230 (76%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | || |||||||| |||||||||||||| ||||| |||||| Sbjct 3448166 GCCTCCACGGAGACGGAGGACGAGATGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCT 3448107 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || || || |||| ||||| ||||||||||| || || ||||||||||| || | ||| Sbjct 3448106 CAGAGTTCGGCCGTCTTCGAGTTGCTTGCCGGCAAAGATGAGGCGCTGTTGATCGGGGGG 3448047 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 || || |||||||||| || | || | || || | | | |||||||| ||||| | Sbjct 3448046 AATGCCCTCCTTGTCC-TGGATCTTGGATTTGACATTGTCGATGGTGTCGCTGGACTCGA 3447988 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| | || || || || || |||| ||||| || |||||||||||| Sbjct 3447987 CCTCAAGGGTGATGGTCTTGCCAGTCAAAGTCTTGACAAAAATCTGCATG 3447938 Score = 114 bits (126), Expect = 1e-20 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | || ||||| || ||| ||||| |||||||| ||||| Sbjct 3448394 GCCACCACGAAGACGCAGGACAAGATGGAGTGTGGATTCCTTTTGAATGTTGTAGTCACT 3448335 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||| || || |||| || | |||||| || ||||| ||||| || || ||||| | || Sbjct 3448334 GAGCGTACGACCGTCCTCCAACTGCTTTCCAGCGAAAATCAGACGTTGCTGGTCGGGTGG 3448275 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | ||||||||| ||| || ||| | || | | | ||||||||||| || | Sbjct 3448274 GATACCCTCCTTGTCTTGGATCTTGCTCTTGA-CGTTGTCGATGGTGTCGCTCGATTCAA 3448216 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||||| || ||||| || || ||||| ||||| || || || |||||| Sbjct 3448215 CCTCCAGAGTAATCGTCTTGCCGGTCAGAGTCTTGACAAAGATTTGCATG 3448166 Score = 104 bits (114), Expect = 2e-17 Identities = 165/233 (71%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || | ||||||| ||| || || ||||||||||| ||||| ||||| || Sbjct 3448622 GCCACCACGCAGTCTCAACACCAAATGAAGAGTACTCTCCTTCTGGATGTTGTAGTCTGA 3448563 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || || || | || || | |||||| ||||| || |||| | ||| ||||||| || Sbjct 3448562 CAGTGTTCGGCCATCCTCCAACTGCTTACCGGCAAAGATCAATCTCTGCTGGTCCGGTGG 3448503 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACT 41810 || || |||||||||| ||| | || | | ||| | | | || || ||| || Sbjct 3448502 AATGCCCTCCTTGTCC-TGAATCTTCGACTTGACGTTGTCGATCGTATCTGAGCT---CT 3448447 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | ||||| | ||| || || || || ||||| || || || || || |||||| Sbjct 3448446 CTACCTCGAGCGTGATTGTCTTTCCAGTCAGAGTTTTGACAAATATTTGCATG 3448394 >seq1 Length=4892217 Score = 116 bits (128), Expect = 3e-21 Identities = 106/134 (79%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| || || || || || || || ||| |||||||| ||||| ||||||||| Sbjct 3970596 CCACCGCGGAGGCGCAAGACGAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAG 3970655 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || ||||| |||||||||||||| |||||||| || ||||||| ||| Sbjct 3970656 AGCGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCCGGAGGA 3970715 Query 41756 ACGCTCTCCTTGTC 41769 | || |||||||| Sbjct 3970716 ATGCCTTCCTTGTC 3970729 >seq45 Length=2675113 Score = 100 bits (110), Expect = 3e-16 Identities = 133/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| |||||| || || || | || |||||||||||||||||||| | Sbjct 831385 CCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCTTCGAGCTGCTTGCCGGCGAAGA 831444 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792 ||| |||||| ||||| | || | || |||||||| ||| || ||| ||| | Sbjct 831445 TCAAGCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTTGGACTT-GACGTTG 831503 Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 | | |||||| |||||| ||||| | || || || || ||||| || ||||| ||| Sbjct 831504 TCGATCGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACG 831563 Query 41852 AA 41853 || Sbjct 831564 AA 831565 >seq5 Length=1165522 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 85800 CGTATCGCACCTCGTTCCGGCCTCGCCAGCAAGCACGGTATCGACGTGGGCGCCGGGGTC 85859 || ||||| || || || ||||| ||| |||||| |||||| |||||| || ||| Sbjct 537309 CGCATCGCGCCGCGCTCGGGCCTGGCCGCGAAGCACTTCATCGACACGGGCGCGGGCGTC 537250 Query 85860 ATCGACGCCGACTACCGCGGAAACGTCATCATCGTACTCTTCAACCACGGCGA 85912 |||||||||||||||||||| | |||| | | || |||||||||||||| Sbjct 537249 ATCGACGCCGACTACCGCGGCGAGGTCAAGGTGCTGCTGTTCAACCACGGCGA 537197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303670608400