Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq79 172 7e-38 >seq79 Length=400725 Score = 172 bits (190), Expect = 7e-38 Identities = 621/961 (65%), Gaps = 18/961 (2%) Strand=Plus/Minus Query 53711 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 53770 || |||||||| || || || ||||||| | | ||| |||| | ||||| |||||| Sbjct 383329 GAGGCCAGATTGCACACAGCGACCTCATCGGGAGCCGTGTATTCGACAATCTCGGTGCAA 383270 Query 53771 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 53830 || || | | |||||| || || || | || || ||||| |||| || ||||| Sbjct 383269 AGGTTGGAGCTCCGGATGGTACCCAAGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCT 383210 Query 53831 TTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACG 53890 ||||| || ||| | || |||||||| || | || | || | || || | ||||| Sbjct 383209 TTATAGAGCATGTAGGGTGTACCAGTCTCGGTTTGTGCCTCGAGGATAGCATACCAGAGC 383150 Query 53891 ACACGAGCCTTTATTATAGATTTGT-ATCTCTTTTCTCTTTCGTATAGTGTATACAATCG 53949 ||||||| | || | | | | | ||| || ||| | | | || | Sbjct 383149 TTCTGAGCCTTGAC---AGTCTGGCGACCACGACCCTCCCTCTCATATT-TCTCGTATAG 383094 Query 53950 TTCA---AACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAA 54006 | || ||||| || || | |||| | | | ||||| |||| ||||| | | Sbjct 383093 TGCATTGAACTCATCGCCATAGACATCGGCAAGACCAGGGGCCTCATGGGGACAGAAGAG 383034 Query 54007 CGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTAT 54066 | ||| || || | || || |||| ||| || | |||||| |||| | ||| || Sbjct 383033 TGTCCATTCCTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACAAAGC-AT 382975 Query 54067 A-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACG 54125 | || | || | | ||| || || || || |||||| | || | | || Sbjct 382974 AGAACAAGTCCCGTGCTCTGACCTCTTCTTTGCCATGGTTCTTTCTCAGGTTCAAAAAGT 382915 Query 54126 CCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTC 54185 | | | || | ||||| || || | ||| |||| | | || || || ||||| | Sbjct 382914 CGAACACGTCCGCGTGCCAGGGCTCGAGGTAGATGGCAAAGGCACCTGGACGCTTGTTGC 382855 Query 54186 CTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCAT 54245 | |||||||| | ||| | || || || || | || | | ||| || || | |||| Sbjct 382854 CGCCCTGATCAACGTACCGTGCTGTATTGTTGAAGACACGAAGCATGGGGATCAGGCCAT 382795 Query 54246 TGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTA--ATTGA 54303 |||| | ||||||||| || | ||||| ||| |||||||||| | | ||||| Sbjct 382794 TGGAGGTACCATTGGTGCCTGCAATATAAGATCCCGTGGCACGAATGCAATGAGCATTGA 382735 Query 54304 TAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 54363 |||| || || || || | || ||||| | || || || | || ||||| || Sbjct 382734 --GACCAATACCTCCAGCTGTCTTGGAGATCATGGCACAGGTCTTGAGGGTGTCATAAAT 382677 Query 54364 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 54423 |||||| ||||| || ||| |||||| | | || || || | ||| | || Sbjct 382676 GCCCTCGATACTGTCTTCCTTCATGTCGATCAAGAAGCATGAGGATAGTTGAGGTTGAGG 382617 Query 54424 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 54483 |||||| ||||| || | || || |||||||| || || || |||| || | ||||| Sbjct 382616 AGTTCCGGCATTGAACAGTGTCGGCGAAGCGTGGGTGAAGCACTTTTGGGACATGAGATT 382557 Query 54484 GTACGTCTCGATAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATT 54541 ||||||||||| || || | || ||| | ||||| || ||||| |||||||| Sbjct 382556 ATACGTCTCGATGGCCTTTTCAACAT--CATCGCCGTGAATGCCGACTGCCACACGCATA 382499 Query 54542 AACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCC 54601 | |||||| || || | ||| ||| || ||| || || |||| ||| ||| | ||| Sbjct 382498 AGCATGTGTTGGGGCCGCTCAGCGACCTGCTTGCCAATCTTGAGCAGGTATGATCTCTCC 382439 Query 54602 AAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTG 54661 || || || || ||||| || | ||| |||||||| || || | ||| | |||||| Sbjct 382438 AACGTCTTGAACCCAAAGTATTGGTAGTTGAAGTCTCGGTCATAGACAATTGCCGAGTTG 382379 Query 54662 A 54662 | Sbjct 382378 A 382378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593719195427520