Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq1 145 8e-30 seq223 129 6e-25 seq287 118 1e-21 seq324 96.9 4e-15 >seq1 Length=1141665 Score = 145 bits (160), Expect = 8e-30 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| |||||||| || || || || ||||| |||||||| | || ||||| ||| | Sbjct 806646 ATGCAGATATTCGTGAAGACTCTTACTGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 806587 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| || |||| ||||| |||||||| ||| |||| ||| Sbjct 806586 GACACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGATCAG 806527 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| ||||| | ||| |||||||| || || |||| || ||| | | |||||||||| Sbjct 806526 CAACGTCTCATTTTCGCCGGCAAACAACTTGAAGACGGCCGTACCTTGAGCGACTACAAC 806467 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| | || || || Sbjct 806466 ATCCAGAAGGAGTCTACTCTTCA 806444 Score = 120 bits (132), Expect = 3e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| |||||||| || || || || ||||| || ||||| |||| || ||| | | Sbjct 806418 ATGCAGATATTCGTCAAGACACTTACTGGCAAGACGATCACGCTCGAGGTTGAATCGAGT 806359 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| ||||| || || | ||||| || |||||||| |||| || Sbjct 806358 GATACCATCGACAACG-TCAAGAGCAAGATCCAAGACAAGGAAGGCATCCCTCCGGATCA 806300 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||| || |||| || ||||| || |||| |||| || |||||| ||||||||| Sbjct 806299 ACAACGTCTGATCTTTGCTGGCAAGCAATTGGAAGACGGCCGTACCCTCTCCGACTACAA 806240 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| | || || ||||| || Sbjct 806239 CATCCAGAAGGAATCAACCCTCCATCTCGT 806210 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| ||||| || || || || || ||||| || || || | || || ||| | | Sbjct 806190 ATGCAGATATTTGTCAAGACACTTACTGGCAAGACGATTACACTGGAGGTGGAAAGCTCA 806131 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| ||||| || |||| ||||| ||||| || || | ||||| Sbjct 806130 GACACAATCGACAACG-TCAAGTCGAAGATTCAAGACAAGGAGGGTATTCCGCCCGACCA 806072 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || ||||| |||| || ||||| ||| |||| |||| || || || |||||||| Sbjct 806071 ACAGCGACTGATCTTTGCTGGCAAGCAGTTGGAGGACGGACGAACACTGTCGGACTACAA 806012 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||| ||||||||| ||| ||||| Sbjct 806011 CATTCAGAAGGAGAGCACTCTGCA 805988 >seq223 Length=821444 Score = 129 bits (142), Expect = 6e-25 Identities = 357/541 (66%), Gaps = 10/541 (2%) Strand=Plus/Minus Query 116870 ATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCG 116929 ||||||||| | |||||||| ||||| || || ||||| || ||| | | Sbjct 601705 ATGGAGAACATTCACTCGGAGATGTACAGTCTTCTGATTGACACCTATGTGAAGGATCCC 601646 Query 116930 GAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCC 116989 | |||||| | |||| ||||| |||| || || || ||| | |||| || Sbjct 601645 AAAGAGAAGACGTATCTGTTTGACGCCGTCGACACAATCCCTTGCATTCGCAAGAAAGCA 601586 Query 116990 GAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCC 117049 || ||||| |||| |||||| | | || |||| | ||| | | || ||||| ||| Sbjct 601585 GACTGGGCTTTGCGATGGATCTCAGACAAAGAGTCGAGCTTTGCTCAACGTCTGGTTGCC 601526 Query 117050 TTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAG 117109 ||||| || ||||| ||| ||||||| || || || || |||| || ||||| ||| Sbjct 601525 TTCGCTGCTGTCGAAGGCATCTTCTTCTCTGGATCGTTTGCATCCATCTTCTGGCTGAAG 601466 Query 117110 AAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGT 117169 | || |||||||| ||||| || ||| ||||||||||||||| | || || || Sbjct 601465 AGCAAGGGTCTCATGCCTGGCCTCACCTTCTCCAACGAGCTCATCTCTCGTGATGAAGGC 601406 Query 117170 CTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCG 117229 ||||| |||||||| || ||||| | | ||| || ||| || | | Sbjct 601405 ATGCATACGGACTTTGCATGCCTGCTGATGCAACATCTGCAGCACAAGCCTGACCCACAA 601346 Query 117230 CGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCG 117289 | | || | || | || || || ||| ||||| || || |||||||| || Sbjct 601345 CTCATCGAAAACATTATAACAGAGGCTGTCAAGATCGAAAAGGAATTTCTCACCGATGCC 601286 Query 117290 CTGCCGGT-GCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTCG 117347 || || || || | |||| || | || | |||| | |||| || ||||| ||||| | Sbjct 601285 CTTCCTGTCGCAT-TGCTTGGCATGAACT-CGAAGCTCATGTGTCAGTACATTGAGTTTG 601228 Query 117348 TCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGC---ACTACAACACGCCCAACC 117404 |||| ||| | |||| |||| ||| ||| ||||| ||||||| ||| |||| Sbjct 601227 TCGCTGACCGCTTGCTCCTCGCCCTG---GGCAACAAGCGATACTACAATGCGCAAAACC 601171 Query 117405 C 117405 | Sbjct 601170 C 601170 >seq287 Length=185442 Score = 118 bits (130), Expect = 1e-21 Identities = 137/182 (75%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACA-GCGT 40757 ||||| || || ||||||||||| ||||||||| |||| ||||| | |||||| | Sbjct 123591 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCGACACGATC 123650 Query 40758 GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817 | |||| ||||| || || | ||||| || |||||||| | |||||||| ||| | Sbjct 123651 GACAACG-TCAAGTCCAAGATCCAAGACAAGGAAGGCATCCCACCCGACCAGCAGCGATT 123709 Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877 |||| ||| ||||| || || || || | |||||||| | |||||||| |||||||| Sbjct 123710 GATCTTCGCCGGCAAGCAACTTGAGGATGGCCGCACCCTGAGTGACTACAATATCCAGAA 123769 Query 40878 GG 40879 || Sbjct 123770 GG 123771 >seq324 Length=116152 Score = 96.9 bits (106), Expect = 4e-15 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| || || || ||| | ||||||||||| || |||| ||| ||||| || || || Sbjct 50672 GACAAGGAAGGGATTCCCCCCGACCAGCAACGCCTGATCTTCGCCGGCAAGCAACTCGAA 50613 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||| ||||| ||| ||||||||||||||||||||| |||| || || || || Sbjct 50612 GACGGCCGCACTCTCTCCGACTACAACATCCAGAAGGAATCCACCCTCCACCTGGT 50557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515217113362240