Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq1 116 4e-21 seq287 102 9e-17 >seq1 Length=1141665 Score = 116 bits (128), Expect = 4e-21 Identities = 178/246 (72%), Gaps = 11/246 (4%) Strand=Plus/Plus Query 42943 TATTGTCCTATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAA 43002 ||||| | || || ||||| | | | || |||||| |||| ||||||||||| |||| Sbjct 805951 TATTG-CTTACTGACCTCCACGCAGTCTCAGCACCAAGTGCAGAGTGCTCTCCTTCTGAA 806009 Query 43003 TATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCT 43062 | ||||| || | ||| || || |||| || | |||||| ||||| || || ||||||| Sbjct 806010 TGTTGTAGTCCGACAGTGTTCGTCCGTCCTCCAACTGCTTGCCAGCAAAGATCAGTCGCT 806069 Query 43063 GCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGT 43120 | ||||||| ||| | | |||||||| | ||| | || | |||| ||| | | | || Sbjct 806070 GTTGGTCGGGCGGAATACCCTCCTTGT-CTTGAATCTTCGACTTGA-CGTTGTCGATTGT 806127 Query 43121 GTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGAT 43177 ||| ||| |||||| || | || || || ||||| || || ||||| ||||| || Sbjct 806128 GTCTGAGCT---TTCCACCTCCAGTGTAATCGTCTTGCCAGTAAGTGTCTTGACAAATAT 806184 Query 43178 TTGCAT 43183 ||||| Sbjct 806185 CTGCAT 806190 >seq287 Length=185442 Score = 102 bits (112), Expect = 9e-17 Identities = 134/183 (73%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| || |||||||| ||| ||| || || | || || || ||||| || ||||| | Sbjct 123771 CCTTCTGGATATTGTAGTCACTCAGGGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAGA 123712 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113 | | |||||||||||||| || | || |||||||| ||| || |||| ||| | Sbjct 123711 TCAATCGCTGCTGGTCGGGTGGGATGCCTTCCTTGTCTTGGATCTTGGACTTGA-CGTTG 123653 Query 43114 -CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||||| ||| || || |||| |||||||| |||||||| || ||||| || Sbjct 123652 TCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACG 123593 Query 43173 AAG 43175 ||| Sbjct 123592 AAG 123590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571815284138720