Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq223 141 2e-28 seq79 123 5e-23 >seq223 Length=821444 Score = 141 bits (156), Expect = 2e-28 Identities = 224/318 (70%), Gaps = 11/318 (3%) Strand=Plus/Minus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 |||||||| ||||| || ||||| |||||||| ||| | || |||||||| |||||| Sbjct 601531 GTTGCCTTCGCTGCTGTCGAAGGCATCTTCTTCTCTGGATCGTTTGCATCCATCTTCTGG 601472 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 | |||| || |||| | ||||||| ||||||| |||||| ||| |||| ||| | || Sbjct 601471 CTGAAGAGCAAGGGTCTCATGCCTGGCCTCACCTTCTCCAACGAGCTCATCTCTCGTGAT 601412 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097 ||||| | ||| |||||||||||| ||||| || || | | || | | | | Sbjct 601411 GAAGGCATGCATACGGACTTTGCATGCCTGCTGATGCAACA----TCTGCAG---CACAA 601359 Query 102098 TCAAGAGAAAGGATTC-TTGAA---ATTGTCACTGAAGCCGTCCGAATTGAACAAGAATT 102153 | || | | || | ||| ||| | || || || ||| || ||| | ||||| Sbjct 601358 GCCTGACCCACAACTCATCGAAAACATTATAACAGAGGCTGTCAAGATCGAAAAGGAATT 601299 Query 102154 TCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTA 102213 |||||| | | |||| ||||| ||| | || ||||||| ||| | ||| | ||||| Sbjct 601298 TCTCACCGATGCCCTTCCTGTCGCATTGCTTGGCATGAACTCGAAGCTCATGTGTCAGTA 601239 Query 102214 CATTGAATTTGTGGCAGA 102231 |||||| ||||| || || Sbjct 601238 CATTGAGTTTGTCGCTGA 601221 >seq79 Length=400725 Score = 123 bits (136), Expect = 5e-23 Identities = 179/250 (72%), Gaps = 2/250 (1%) Strand=Plus/Minus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851 |||||||| ||||||||||| || || ||| || || |||||||| ||||| || Sbjct 382726 CCTCCAGCTGTCTTGGAGATCATGGCACAGGTCTTGAGGGTGTCATAAATGCCCTCGATA 382667 Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGA-CTGTTCCACA 94910 || || || | | | | | | |||||| ||||| ||||| ||| ||| ||||| Sbjct 382666 CTGTCTTCCTTCATGTCGATCAAGAAGCATGAGGATAGTTGAGGT-TGAGGAGTTCCGGC 382608 Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTC 94970 ||| |||||||| || ||||| ||||| || | | |||||||||| ||| || || Sbjct 382607 ATTGAACAGTGTCGGCGAAGCGTGGGTGAAGCACTTTTGGGACATGAGATTATACGTCTC 382548 Query 94971 AATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTG 95030 ||| | || | || |||||||||||||| ||||||||||||| ||||| || Sbjct 382547 GATGGCCTTTTCAACATCATCGCCGTGAATGCCGACTGCCACACGCATAAGCATGTGTTG 382488 Query 95031 AGGGCGCTCA 95040 || |||||| Sbjct 382487 GGGCCGCTCA 382478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989579891989420