Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq1 125 5e-24 >seq1 Length=1141665 Score = 125 bits (138), Expect = 5e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 |||||||||||||| | |||||| || | |||||||||||| || | ||||| || ||| Sbjct 805964 CCTCCACGCAGTCTCAGCACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCCGAC 806023 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | ||| ||| |||| ||||| || ||||| ||||| |||| ||||||||| |||| ||| Sbjct 806024 AGTGTTCGTCCGTCCTCCAACTGCTTGCCAGCAAAGATCAGTCGCTGTTGGTCGGGCGGA 806083 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTCGAC 43061 | ||| || || || ||| | ||||| || | | |||||| ||| || || Sbjct 806084 ATACCCTCCTTGTCTTGAATCTTCGACTTGACGTTGTCGATTGTGTC-TGAGCTTTCCAC 806142 Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || || || || || || || || || ||||| || ||||| Sbjct 806143 CTCCAGTGTAATCGTCTTGCCAGTAAGTGTCTTGACAAATATCTGCAT 806190 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941 |||||| || || | | ||||| || | ||| |||||| || | ||||| ||| Sbjct 806419 GCCTCCGCGGAGACGAAGGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCT 806478 Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001 ||| ||||| |||| || | |||||||||||| ||||| | || || ||||| | || Sbjct 806479 CAAGGTACGGCCGTCTTCAAGTTGTTTGCCGGCGAAAATGAGACGTTGCTGATCCGGGGG 806538 Query 43002 CACACCTTCTTTTTCGCTG-ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGA 43060 | || || || || ||| ||| ||||| || | | ||||||| | ||||| Sbjct 806539 AATGCCCTCCTTGTC-CTGAATCTTGGACTTGACATTGTCGATGGTGTCGCTGGACTCGA 806597 Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 | || | || || || || || || ||||| ||||| || || ||||| Sbjct 806598 CCTCAAGAGTGATGGTCTTGCCAGTAAGAGTCTTCACGAATATCTGCAT 806646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381368094066792