Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq1 109 6e-19 seq223 91.5 1e-13 >seq1 Length=1141665 Score = 109 bits (120), Expect = 6e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 |||||| || | ||| | || || |||| ||||| || || || |||||||| ||||| Sbjct 806419 GCCTCCGCGGAGACGAAGGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCT 806478 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 || || | |||||| |||||||| || || | || |||||||||||||| || || Sbjct 806479 CAAGGTACGGCCGTCTTCAAGTTGTTTGCCGGCGAAAATGAGACGTTGCTGATCCGGGGG 806538 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 ||||| || ||||| ||| || || | | || | ||||| ||| || || Sbjct 806539 AATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCGCTGGACTCGAC 806598 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||| ||| | |||||||| || | || || |||||||| ||||| Sbjct 806599 CTCAAGAGTGATGGTCTTGCCAGTAAGAGTCTTCACGAATATCTGCAT 806646 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 || ||||| || || |||||||| ||| | || | |||||| | ||| || ||| Sbjct 806222 GTTGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTCTTCCAATTGCTTGCCA 806281 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 ||| ||||||||||||| ||||| ||||| |||||||| ||||| || || || Sbjct 806282 GCAAAGATCAGACGTTGTTGATCCGGAGGGATGCCTTCCTTGTCTTGGATCTTGCTCTTG 806341 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | | || | || || | | ||| || || | || | ||||||||| || | ||| Sbjct 806342 ACGTTGTCGATGGTATCACTCGATTCAACCTCGAGCGTGATCGTCTTGCCAGTAAGTGTC 806401 Query 143168 TTTACGAATATTTGCAT 143184 || |||||||| ||||| Sbjct 806402 TTGACGAATATCTGCAT 806418 >seq223 Length=821444 Score = 91.5 bits (100), Expect = 1e-13 Identities = 207/305 (68%), Gaps = 21/305 (7%) Strand=Plus/Minus Query 50500 ATGCCCGGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCACACAGAC 50559 ||||| |||||||| || ||||||| | || || || || ||||| ||||| || ||| Sbjct 601453 ATGCCTGGCCTCACCTTCTCCAACGAGCTCATCTCTCGTGATGAAGGCATGCATACGGAC 601394 Query 50560 TTTGCGTGTTTG-TACTACAATACGCGC-GTAAA----TGAAAAATTA-TCATACGAAAC 50612 ||||| || || | | ||| | || | | | ||| | | |||| ||||| Sbjct 601393 TTTGCATGCCTGCTGATGCAACATCTGCAGCACAAGCCTGACCCACAACTCAT-CGAAA- 601336 Query 50613 AATTTTGGACATGTTCAAAGAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTT 50672 |||| | | ||| || ||| | |||||||| || ||| |||| || || | Sbjct 601335 --------ACATTATAACAGAGGCTGTCAAGATCGAAAAGGAATTTCTCACCGATGCCCT 601284 Query 50673 ACCCGTGGCATTGTTGGGCATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGC 50732 || || |||||| | ||||||||| | | | ||||| |||||||||||||||| || Sbjct 601283 TCCTGTCGCATTGCTTGGCATGAACTCGAAGCTCATGTGTCAGTACATTGAGTTTGTCGC 601224 Query 50733 AGACAGATTGTTGTTGCAGCTGGG--ACAACCGAAATACTATAATGCACGTAACCCCTTT 50790 ||| | ||| | | ||||| |||| || |||||| ||||| | |||||||| Sbjct 601223 TGACCGCTTGCTCCTCGCCCTGGGCAACAAGCG--ATACTACAATGCGCAAAACCCCTTC 601166 Query 50791 CCGTT 50795 || || Sbjct 601165 CCATT 601161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507012346591680