Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq223 150 3e-31 seq79 143 4e-29 >seq223 Length=821444 Score = 150 bits (166), Expect = 3e-31 Identities = 347/514 (68%), Gaps = 19/514 (4%) Strand=Plus/Minus Query 125244 TTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTAC 125303 || ||| ||||||| |||||| | |||||||| |||||| | |||||||||| || Sbjct 601717 TTTCAAGTCATGATGGAGAACATTCACTCGGAGATGTACAGTCTTCTGATTGACACCTAT 601658 Query 125304 ATTCGCGATCCGCAACGTAAACACATG-CTCTTTAACGCAATCGACACGGTGCCGTCTAT 125362 | ||||| ||| | || || | || ||| |||| ||||||| | || | || Sbjct 601657 GTGAAGGATCC-CAAAGAGAAGACGTATCTGTTTGACGCCGTCGACACAATCCCTTGCAT 601599 Query 125363 ACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGA 125422 || || || || | |||| | || |||||| ||| | |||| | || | Sbjct 601598 TCGCAAGAAAGCAGACTGGGCTTTGCGATGGATCTCAGACAAAGAGTCGAGCTTTGCTCA 601539 Query 125423 CAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCAT 125482 | ||||| || ||||| || || || ||||||||||| || || ||||| |||| Sbjct 601538 ACGTCTGGTTGCCTTCGCTGCTGTCGAAGGCATCTTCTTCTCTGGATCGTTTGCATCCAT 601479 Query 125483 CTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATC 125542 ||| ||||| |||| || |||||||| || || || | |||||| | || || Sbjct 601478 CTTCTGGCTGAAGAGCAAGGGTCTCATGCCTGGCCTCACCTTCTCCAACGAGCTCATCTC 601419 Query 125543 TCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCC 125602 ||| || || ||| | || |||||||| || ||| | ||||| |||||| | Sbjct 601418 TCGTGATGAAGGCATGCATACGGACTTTGCATGCCTGCTGAT--GCAAC-ATCTGCAGCA 601362 Query 125603 CGAGTGCAGATCCAGCGATGAAAAGGTCATC---AACATTGTAACCGATGCCGTGAGGAT 125659 | || | || || | | ||||| |||||| |||| || || || | ||| Sbjct 601361 CAAG-CCTGACCC--------ACAACTCATCGAAAACATTATAACAGAGGCTGTCAAGAT 601311 Query 125660 AGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCA-TGATTGGCATGAACTGCAAGC 125718 ||| | || ||||| ||||| |||| || ||| ||| || |||||||||||| |||| Sbjct 601310 CGAAAAGGAATTTCTCACCGATGCCCTTCCTGTC-GCATTGCTTGGCATGAACTCGAAGC 601252 Query 125719 TAATGTGCGAGTACATAGAGTTTGTGGCAGATCG 125752 | ||||| ||||||| |||||||| || || || Sbjct 601251 TCATGTGTCAGTACATTGAGTTTGTCGCTGACCG 601218 >seq79 Length=400725 Score = 143 bits (158), Expect = 4e-29 Identities = 336/500 (67%), Gaps = 8/500 (2%) Strand=Plus/Plus Query 96862 CACGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAAC 96921 |||| |||||| ||||||||||| || || ||||| || | ||| ||||| | || | Sbjct 382834 CACGGTACGTTGATCAGGGCGGCAACAAGCGTCCAGGTGCCTTTGCCATCTACCTCGAGC 382893 Query 96922 CTTGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGG 96981 | |||||||||||||| || |||||| | | || | || ||| |||| ||||||| Sbjct 382894 CCTGGCACGCGGACGTGTTCGACTTTTTGAACCTGAGAAAGAACCATGGCAAAGAAGAGG 382953 Query 96982 CACGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC- 97040 |||| |||||||||| ||||| | ||| || || ||||||||| | || ||| Sbjct 382954 TCAGAGCACGGGACTTGTTCTATGCTTTGTGGACTCCTGACTTGTTCATGGAACGTGTCG 383013 Query 97041 -AACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTG 97099 | || || | |||| || | || ||| | | | || ||||| ||||| Sbjct 383014 AGAAGAACCAGG--AATGGACACTCTTCTGTCCCCATGAGGCCCCTGGTCTTGCCGATGT 383071 Query 97100 CTGGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGA 97158 || ||||| ||||| | || ||| | || ||| ||||| || || | Sbjct 383072 CTATGGCGATGAGTTCAATGCACTATACGAGAAATATGAGAGGGAGGGTCGTGGTCGCCA 383131 Query 97159 GACGAGTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGA 97217 ||| ||| | || | |||| || ||| | || ||| | ||| || |||||||| Sbjct 383132 GAC-TGTCAAGGCTC-AGAAGCTCTGGTATGCTATCCTCGAGGCACAAACCGAGACTGGT 383189 Query 97218 ACTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGC 97277 || || ||||| ||||| || ||| || || | || |||||||| ||||||| Sbjct 383190 ACACCCTACATGCTCTATAAAGATGCCTGCAACAGGAAGAGCAACCAGAAGAACTTGGGT 383249 Query 97278 ACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACG 97337 |||||| | ||||||| || ||||| || ||||| || ||| | |||| || ||| Sbjct 383250 ACCATCCGGAGCTCCAACCTTTGCACCGAGATTGTCGAATACACGGCTCCCGATGAGGTC 383309 Query 97338 GCAGTTTGCGTTCTGGCATC 97357 || || ||| |||||| || Sbjct 383310 GCTGTGTGCAATCTGGCCTC 383329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741056198710240