Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq1 149 1e-30 >seq1 Length=1141665 Score = 149 bits (164), Expect = 1e-30 Identities = 166/219 (76%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 |||| || || ||||| | || ||||| ||||| || || ||||| || || || | Sbjct 806201 AGCCGTAGGACGAGATGGAGGGTTGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGG 806260 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 |||||||| | ||| || |||||||| || || | |||||||| ||||| || ||||| Sbjct 806261 CCGTCTTCCAATTGCTTGCCAGCAAAGATCAGACGTTGTTGATCCGGAGGGATGCCTTCC 806320 Query 104462 TTATCCTGAATCTTTGCTTTT-ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGT 104520 || || || ||||| ||| || || || || | |||||| || | ||| ||||| || || Sbjct 806321 TTGTCTTGGATCTT-GCTCTTGACGTTGTCGATGGTATCACTCGATTCAACCTCGAGCGT 806379 Query 104521 AATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| ||||||||||| || || ||||||||||| Sbjct 806380 GATCGTCTTGCCAGTAAGTGTCTTGACGAATATCTGCAT 806418 Score = 125 bits (138), Expect = 2e-23 Identities = 145/194 (75%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || |||||||| || ||||| || || |||| ||||| || | || || |||||||| Sbjct 806000 TCCTTCTGAATGTTGTAGTCCGACAGTGTTCGTCCGTCCTCCAACTGCTTGCCAGCAAAG 806059 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || || | |||||| || || || || || || || || |||||||| | || || || Sbjct 806060 ATCAGTCGCTGTTGGTCGGGCGGAATACCCTCCTTGTCTTGAATCTTCGACTTGACGTTG 806119 Query 104489 TCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTT 104545 || | || || ||| ||| ||||| |||||||| ||||| ||||||||||| || Sbjct 806120 TCGATTGTGTCTGAGCT---TTCCACCTCCAGTGTAATCGTCTTGCCAGTAAGTGTCTTG 806176 Query 104546 ACAAATATCTGCAT 104559 |||||||||||||| Sbjct 806177 ACAAATATCTGCAT 806190 Score = 125 bits (138), Expect = 2e-23 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| || ||||| || || ||||| | || | |||||||| |||||||| || Sbjct 806450 GTAGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTACGGCCGTCTTCAAGTTGTTTGCCG 806509 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || ||||| || | || ||||| || || || || || || ||||||||||| | || Sbjct 806510 GCGAAAATGAGACGTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTG 806569 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||| ||||| | || ||||| || || || ||||| |||||||| || Sbjct 806570 ACATTGTCGATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCAGTAAGAGTC 806629 Query 104543 TTTACAAATATCTGCAT 104559 || || ||||||||||| Sbjct 806630 TTCACGAATATCTGCAT 806646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151393620257392