Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq1 125 6e-24 >seq1 Length=1141665 Score = 125 bits (138), Expect = 6e-24 Identities = 157/212 (74%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | |||||| ||||| || | ||| || ||||||| || | || || Sbjct 806438 ACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTACGGCCGTCTTCA 806497 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 || ||||| ||| | || || | | ||||||||| || ||||| || || ||||| | | Sbjct 806498 AGTTGTTTGCCGGCGAAAATGAGACGTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGA 806557 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG--TCGACGTCAATCGTGATGGTTT 94976 || || | |||||| | ||| ||||| || ||| ||||| |||| |||||||| | Sbjct 806558 ATCTTGGACTTGACATTGTCGATGGTGTC-GC-TGGACTCGACCTCAAGAGTGATGGTCT 806615 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 | ||||||||||| ||||| || ||||||||| Sbjct 806616 TGCCAGTAAGAGTCTTCACGAATATCTGCATG 806647 Score = 102 bits (112), Expect = 7e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 ||||| | || || || ||||||||||| ||| ||||| || | ||| || | | Sbjct 805964 CCTCCACGCAGTCTCAGCACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAGT--CCG 806021 Query 94841 ATAGTGTTGG--AATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 | |||||| | ||||||| ||| || || ||||||| | || || || || || | Sbjct 806022 ACAGTGTTCGTCCGTCCTCCAACTGCTTGCCAGCAAAGATCAGTCGCTGTTGGTCGGGCG 806081 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 ||||||| || ||||| | ||| || | ||||||| | ||| ||||| | | || | Sbjct 806082 GAATACCCTCCTTGTCTTGAATCTTCGACTTGACGTTGTCGATTGTGTCTGAGCTTTCCA 806141 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || | || || || || |||||||| || || ||||| |||||||| Sbjct 806142 CCTCCAGTGTAATCGTCTTGCCAGTAAGTGTCTTGACAAATATCTGCAT 806190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448289384420640