Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq8 168 1e-37 seq235 123 4e-24 >seq8 Length=110107 Score = 168 bits (186), Expect = 1e-37 Identities = 163/207 (79%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || || || || |||| ||| |||||| || ||||||||||| ||||||||||| ||||| Sbjct 34054 GCCAAACGCCACCGCAAGAT-TCTTCGTGACAACATCCAAGGTATCACCAAGCCTGCTAT 33996 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| |||||||||||||| ||||||||| |||| | || |||| ||||||| Sbjct 33995 CCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCAGCCATGATCTACGAAGAGAC 33936 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| | ||| ||||||| | | || || | ||| ||| || ||||||||| Sbjct 33935 CCGTGGTGTCCTCAAGTCCTTCCTCGAATCGGTCATTCGTGACGCTGTCACCTATACCGA 33876 Query 16612 GCACGCTAAACGTAAGACTGTCACCTC 16638 |||||| || | ||||||||||| || Sbjct 33875 GCACGCAAAGAGAAAGACTGTCACTTC 33849 >seq235 Length=291993 Score = 123 bits (136), Expect = 4e-24 Identities = 120/153 (78%), Gaps = 1/153 (1%) Strand=Plus/Plus Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507 |||| |||||| || |||||||| || ||||||||||| ||||| || ||||| || ||| Sbjct 259770 AGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCTATTCGACGTCTCGCCCGT 259828 Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 |||||||| ||||||||| |||| | || |||| ||||||| |||| ||| | ||| Sbjct 259829 CGTGGTGGTGTCAAGCGTATCTCAGCCATGATCTACGAAGAGACCCGTGGTGTCCTCAAG 259888 Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTC 16600 | |||||| | ||||||| ||||||| || Sbjct 259889 ACCTTCCTGGAAGGTGTTATCCGTGATGCTGTC 259921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074903764532