Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq1 104 2e-17 >seq1 Length=1141665 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || ||||| |||| ||||| ||| |||||| || ||||||||||| | | Sbjct 805964 CCTCCACGCAGTCTCAGCACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCCGAC 806023 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| |||||||||| || ||||| ||| | || || ||||||||||| || Sbjct 806024 AGTGTTCGTCCGTCCTCCAACTGCTTGCCAGCAAAGATCAGTCGCTGTTGGTCGGGCGGA 806083 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| ||||| ||| | | ||| || | | | | ||||| | ||| Sbjct 806084 ATACCCTCCTTGTCTTGAATCTTCGACTTGACGTTGTCGATTGTGTCTGAGCTTTCCACC 806143 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || || || || || || || || |||||||| |||||||| Sbjct 806144 TCCAGTGTAATCGTCTTGCCAGTAAGTGTCTTGACAAATATCTGCAT 806190 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || |||| || || || |||||||| || |||||||||||| | Sbjct 806420 CCTCCGCGGAGACGAAGGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 806479 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | |||| || | ||||||||| || |||| || || || || ||| || Sbjct 806480 AAGGTACGGCCGTCTTCAAGTTGTTTGCCGGCGAAAATGAGACGTTGCTGATCCGGGGGA 806539 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | |||||| ||||| ||| | ||| || | | | | ||||||| || ||| Sbjct 806540 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCGCTGGACTCGACC 806599 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||||| || || || || || || || || |||||||| Sbjct 806600 TCAAGAGTGATGGTCTTGCCAGTAAGAGTCTTCACGAATATCTGCAT 806646 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || |||| || || | ||| || || || ||||| || ||||||||||||| Sbjct 806192 CCTCCGCGAAGCCGTAGGACGAGATGGAGGGTTGATTCCTTCTGGATGTTGTAGTCGGAG 806251 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | |||| |||||||| ||||| ||| | || || || ||||| ||| ||| Sbjct 806252 AGGGTACGGCCGTCTTCCAATTGCTTGCCAGCAAAGATCAGACGTTGTTGATCCGGAGGG 806311 Query 16829 ACGCCCTCTTTGTC-GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887 | ||| || ||||| | | ||||| ||| || | | | | || || | | || Sbjct 806312 ATGCCTTCCTTGTCTTGGATCTTGCT-CTTGACGTTGTCGATGGTATCACTCGATTCAAC 806370 Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||| || || || || || || ||||| || |||||||| Sbjct 806371 CTCGAGCGTGATCGTCTTGCCAGTAAGTGTCTTGACGAATATCTGCAT 806418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405086400408760