Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq213 140 2e-28 seq1 105 4e-18 >seq213 Length=2238 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 786 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 727 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 726 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 692 >seq1 Length=1141665 Score = 105 bits (116), Expect = 4e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 || |||||| || |||||||||||||| ||||| ||||| || |||| ||| |||| Sbjct 805978 CAGCACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCCGACAGTGTTCGTCCGTC 806037 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224 || || || || || ||||| || || || ||||| |||| || | || || ||||| Sbjct 806038 CTCCAACTGCTTGCCAGCAAAGATCAGTCGCTGTTGGTCGGGCGGAATACCCTCCTTGTC 806097 Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284 ||| || ||| || || | || || ||| ||||| || || | |||||| || Sbjct 806098 TTGAATCTTCGACTTGACGTTGTCGATTGTGTCTGAGCTTTCCACCTCCAGTGTAATCGT 806157 Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || || | || || || ||||||||||| Sbjct 806158 CTTGCCAGTAAGTGTCTTGACAAATATCTGCAT 806190 Score = 95.1 bits (104), Expect = 8e-15 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 38109 ACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCT 38168 ||||| |||||||| |||||| || || ||||| || ||| ||| |||| || Sbjct 806438 ACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTACGGCCGTCTTCA 806497 Query 38169 AATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATA 38228 | |||||| ||||| || || || ||||| ||||| | ||| | ||| || |||||| | Sbjct 806498 AGTTGTTTGCCGGCGAAAATGAGACGTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGA 806557 Query 38229 ATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTA 38288 || || ||| ||||| | || || || | || || || | || || || || Sbjct 806558 ATCTTGGACTTGACATTGTCGATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGTCTTG 806617 Query 38289 CCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || || | || |||||||||||||||||| Sbjct 806618 CCAGTAAGAGTCTTCACGAATATCTGCATG 806647 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 38127 TCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAAT 38186 ||||| || || ||||| || || | ||| |||| || ||||| || || ||||| Sbjct 806228 TCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTCTTCCAATTGCTTGCCAGCAAAG 806287 Query 38187 ATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTC 38246 || || ||||||||||| | |||| |||||| ||||| || || ||| || || Sbjct 806288 ATCAGACGTTGTTGATCCGGAGGGATGCCTTCCTTGTCTTGGATCTTGCTCTTGACGTTG 806347 Query 38247 TGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACG 38306 | || ||||| | |||||| || | || || || || || || | || || ||| Sbjct 806348 TCGATGGTATCACTCGATTCAACCTCGAGCGTGATCGTCTTGCCAGTAAGTGTCTTGACG 806407 Query 38307 AATATCTGCATG 38318 |||||||||||| Sbjct 806408 AATATCTGCATG 806419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334945877377244