Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1 91.5 1e-13 >seq1 Length=1141665 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/215 (71%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| ||||| || |||||| | || || || ||||||| | || || ||||| Sbjct 806646 ATGCAGATATTCGTGAAGACTCTTACTGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 806587 Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| ||||| || || ||| | || | ||| ||||| || || ||||| || || Sbjct 806586 GACACCATCGA--CAATGTCAAGTCCAAGATTCAG-GACAAGGAGGGCATTCCCCCGGAT 806530 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || || || | ||||| |||||||||||| | ||||| | || || || |||| ||| Sbjct 806529 CAGCAACGTCTCATTTTCGCCGGCAAACAACTTGAAGACGGCCGTACCTTGAGCGACTAC 806470 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || || || || || || || || Sbjct 806469 AACATCCAGAAGGAGTCTACTCTTCACTTGGTCCT 806435 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| |||||||| ||||| | || || || | || ||| | || ||||| || Sbjct 806190 ATGCAGATATTTGTCAAGACACTTACTGGCAAGACGATTACACTGGAGGTGGAAAGCTCA 806131 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| | ||| | || | ||| ||||| || || ||||| || ||||| Sbjct 806130 GACACAATCGACAACGTCAAGTCGAAGATTCAA-GACAAGGAGGGTATTCCGCCCGACCA 806072 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCG--CACTGTGGGCGATTAC 25175 |||||| | || ||||| ||||| || || || || | || |||||| | || ||| Sbjct 806071 ACAGCGACTGATCTTTGCTGGCAAGCAGTTGGAGGACGGACGAACACTGTCG--GACTAC 806014 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||| || || ||| || || || ||||| || || | ||||| Sbjct 806013 AACATTCAGAAGGAGAGCACTCTGCACTTGGTGCTGAGACTGCGTGGAGG 805964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433326288896060