Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1 127 2e-24 >seq1 Length=1141665 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || ||| |||| || || || ||| | | Sbjct 806418 ATGCAGATATTCGTCAAGACACTTACTGGCAAGACGATCACGCTCGAGGTTGAATCGAGT 806359 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | |||| || || ||||||||||| || || || || |||||| Sbjct 806358 GATACCATCGACAACGTCAAGAGCAAGATCCAAGACAAGGAAGGCATCCCTCCGGATCAA 806299 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || ||||| ||||| || || || || ||| ||| ||||||| |||||| Sbjct 806298 CAACGTCTGATCTTTGCTGGCAAGCAATTGGAAGACGGCCGTACCCTCTCCGACTACAAC 806239 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || ||||| ||| | ||| | || | || | ||||||||| Sbjct 806238 ATCCAGAAGGAATCAACCCTCCATCTCGTCCTACGGCTTCGCGGAGGT 806191 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || || ||| | || || || ||||||| | | Sbjct 806190 ATGCAGATATTTGTCAAGACACTTACTGGCAAGACGATTACACTGGAGGTGGAAAGCTCA 806131 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| || ||||||||||||||||||||||| ||||| ||| Sbjct 806130 GACACAATCGACAACGTCAAGTCGAAGATTCAAGACAAGGAGGGTATTCCGCCCGACCAA 806071 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||| ||||| ||||| ||||| || || | || || |||||| Sbjct 806070 CAGCGACTGATCTTTGCTGGCAAGCAGTTGGAGGACGGACGAACACTGTCGGACTACAAC 806011 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || ||| | || || || || || |||| |||||| Sbjct 806010 ATTCAGAAGGAGAGCACTCTGCACTTGGTGCTGAGACTGCGTGGAGGT 805963 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | || || || || |||||||||| || || ||| | Sbjct 806646 ATGCAGATATTCGTGAAGACTCTTACTGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 806587 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || |||| || ||||| ||||||||||| ||||| || ||||| Sbjct 806586 GACACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGATCAG 806527 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || || ||||||||||| | || || ||| ||| | ||| |||||| Sbjct 806526 CAACGTCTCATTTTCGCCGGCAAACAACTTGAAGACGGCCGTACCTTGAGCGACTACAAC 806467 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || || || | || || || | || | |||||||| Sbjct 806466 ATCCAGAAGGAGTCTACTCTTCACTTGGTCCTTCGTCTCCGCGGAGG 806420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419726342599060