Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq1 161 2e-34 seq287 138 2e-27 seq324 109 1e-18 >seq1 Length=1141665 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| || || | || |||||||| || ||| ||| || || ||||| || || || Sbjct 805964 CCTCCACGCAGTCTCAGCACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCCGAC 806023 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | || || || |||||||| || || || || |||| ||||||||||| ||| Sbjct 806024 AGTGTTCGTCCGTCCTCCAACTGCTTGCCAGCAAAGATCAGTCGCTGTTGGTCGGGCGGA 806083 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||||||||| | ||||||| ||||| ||||||| ||| || Sbjct 806084 ATACCCTCCTTGTCTTGAATCTTCGACTTGACGTTGTCGATTGTGTCTGAGCTTTCCACC 806143 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| || || || || || || || |||||||| ||||||||||| Sbjct 806144 TCCAGTGTAATCGTCTTGCCAGTAAGTGTCTTGACAAATATCTGCAT 806190 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||||||||| || | || | || || || || || || |||||||| || |||||| Sbjct 806192 CCTCCGCGAAGCCGTAGGACGAGATGGAGGGTTGATTCCTTCTGGATGTTGTAGTCGGAG 806251 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || ||||| || ||||| || || || || || | |||||| || || || Sbjct 806252 AGGGTACGGCCGTCTTCCAATTGCTTGCCAGCAAAGATCAGACGTTGTTGATCCGGAGGG 806311 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||||||||| ||||| ||||||| |||||||| || ||||| || Sbjct 806312 ATGCCTTCCTTGTCTTGGATCTTGCTCTTGACGTTGTCGATGGTATCACTCGATTCAACC 806371 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| || || || || || |||||||||||||||||||| Sbjct 806372 TCGAGCGTGATCGTCTTGCCAGTAAGTGTCTTGACGAATATCTGCAT 806418 Score = 156 bits (172), Expect = 8e-33 Identities = 173/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 |||||||| || || | |||||||| || || ||||| || |||||||| || ||| Sbjct 806420 CCTCCGCGGAGACGAAGGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 806479 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | || ||||| | || || |||||||| ||||| | ||| || || || ||| Sbjct 806480 AAGGTACGGCCGTCTTCAAGTTGTTTGCCGGCGAAAATGAGACGTTGCTGATCCGGGGGA 806539 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 ||||| |||||||| |||||||| | |||||| ||||||||||| ||| || || || Sbjct 806540 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTC-GCTGGACTCGAC 806598 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||||| || || || || ||||| |||||||||||||| Sbjct 806599 CTCAAGAGTGATGGTCTTGCCAGTAAGAGTCTTCACGAATATCTGCAT 806646 >seq287 Length=185442 Score = 138 bits (152), Expect = 2e-27 Identities = 120/149 (81%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 ||||| || | ||||| |||||||| || | || || ||||||||||| ||||||||| Sbjct 123739 CCATCCTCAAGTTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCGGGTGGGATGCCTTCC 123680 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 |||||||| ||||| | ||||||| ||||| ||||| | || || || || | |||| Sbjct 123679 TTGTCTTGGATCTTGGACTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTG 123620 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 ||||| || |||||||||||||||||||| Sbjct 123619 ATGGTCTTGCCCGTGAGGGTCTTGACGAA 123591 >seq324 Length=116152 Score = 109 bits (120), Expect = 1e-18 Identities = 105/135 (78%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | |||| ||| || ||||| || || |||||||| || |||||| Sbjct 50539 CCACCACGAAGACGGAGGACCAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAG 50598 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || ||||| | ||||| |||||||| || || | ||| |||||||| ||| Sbjct 50599 AGAGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGGGGA 50658 Query 68355 ATGCCTTCCTTGTCT 68369 || |||||||||||| Sbjct 50659 ATCCCTTCCTTGTCT 50673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921618667429280