Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1 174 4e-38 seq287 104 6e-17 >seq1 Length=1141665 Score = 174 bits (192), Expect = 4e-38 Identities = 177/228 (78%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| || | || |||||||| | || ||| || ||||| || ||||||| | Sbjct 806192 CCTCCGCGAAGCCGTAGGACGAGATGGAGGGTTGATTCCTTCTGGATGTTGTAGTCGGAG 806251 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || |||||||| ||||| || || || ||||||||||| |||||| ||| Sbjct 806252 AGGGTACGGCCGTCTTCCAATTGCTTGCCAGCAAAGATCAGACGTTGTTGATCCGGAGGG 806311 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || ||||| || || ||||| || ||| || ||||| || || | ||| |||||||| || Sbjct 806312 ATGCCTTCCTTGTCTTGGATCTT-GCTCTTGACGTTGTCGATGGTATCACTCGATTCAAC 806370 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||||||||||||||| || || || |||||||||||||||||||| Sbjct 806371 CTCGAGCGTGATCGTCTTGCCAGTAAGTGTCTTGACGAATATCTGCAT 806418 Score = 114 bits (126), Expect = 3e-20 Identities = 168/235 (71%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || |||||||| | ||| || | |||| || || || ||||| || |||| Sbjct 806416 CATG-CCTCCGCGGAGACGAAGGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGT 806474 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 || | || || |||||||| | |||||| || ||||| || ||||| || ||| | Sbjct 806475 CGCTCAAGGTACGGCCGTCTTCAAGTTGTTTGCCGGCGAAAATGAGACGTTGCTGA---T 806531 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 | ||| || || || || ||||| || || | || || || || || | ||||| | Sbjct 806532 CCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCGCTGG 806591 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || || || ||||| ||||| || || |||||||| |||||||||||||| Sbjct 806592 ACTCGACCTCAAGAGTGATGGTCTTGCCAGTAAGAGTCTTCACGAATATCTGCAT 806646 Score = 102 bits (112), Expect = 2e-16 Identities = 163/233 (70%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || || || || ||||| || || | || | ||||| || || || || || ||||| Sbjct 805961 TGACCTCCACGCAGTCTCAGCACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCC 806020 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 | || || |||||||| || || || || || || |||||||| |||||||| Sbjct 806021 GACAGTGTTCGTCCGTCCTCCAACTGCTTGCCAGCAAAGATCAGTCGCTGTTGGTCGGGC 806080 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 || || || || || || || || |||| || ||||| || || | || ||| | Sbjct 806081 GGAATACCCTCCTTGTCTTGAATCTTCGACTTGACGTTGTCGATTGTGTCTGAGCT---T 806137 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || |||||||| || || || |||||||| ||||||||||| Sbjct 806138 TCCACCTCCAGTGTAATCGTCTTGCCAGTAAGTGTCTTGACAAATATCTGCAT 806190 >seq287 Length=185442 Score = 104 bits (114), Expect = 6e-17 Identities = 147/206 (71%), Gaps = 3/206 (1%) Strand=Plus/Minus Query 288262 AGTACGAGATGAATCGTGCTTTCT---TTTTGGATATTATAGTCGGCGAGCGTGCGTCCG 288318 ||| ||| | |||| ||| | | | || |||||||| ||||| || ||||| || Sbjct 123796 AGTGCGAAAAGAATTGTGGTATGTACCTTCTGGATATTGTAGTCACTCAGGGTGCGGCCA 123737 Query 288319 TCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTA 288378 || || | ||| || || |||||||||| ||||| || |||||| ||||| || Sbjct 123736 TCCTCAAGTTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCGGGTGGGATGCCTTCCTTG 123677 Query 288379 TCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATC 288438 || ||||| || | || ||||| || || | ||| ||| || || ||||| ||||| Sbjct 123676 TCTTGGATCTTGGACTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATG 123617 Query 288439 GTCTTCCCGGTCAGAGTCTTGACGAA 288464 ||||| || || || ||||||||||| Sbjct 123616 GTCTTGCCCGTGAGGGTCTTGACGAA 123591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179649502959672