Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11]
324 sequences; 35,229,797 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq1 111 2e-19
seq287 107 2e-18
>seq1
Length=1141665
Score = 111 bits (122), Expect = 2e-19
Identities = 169/234 (72%), Gaps = 10/234 (4%)
Strand=Plus/Plus
Query 41980 GACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAG 42039
||||||| | | | || |||||| |||| ||||||||||| ||||| ||||| || |
Sbjct 805962 GACCTCCACGCAGTCTCAGCACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCCG 806021
Query 42040 CCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTG 42099
||| || || |||| || | |||||| ||||| || || |||||||| ||||||| |
Sbjct 806022 ACAGTGTTCGTCCGTCCTCCAACTGCTTGCCAGCAAAGATCAGTCGCTGTTGGTCGGGCG 806081
Query 42100 GCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTC---GCTCGA 42154
| | | |||||||| | ||| | || | |||| ||| | | | ||||| |||
Sbjct 806082 GAATACCCTCCTTGT-CTTGAATCTTCGACTTGA-CGTTGTCGATTGTGTCTGAGCT--- 806136
Query 42155 TTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|||||| || | || || || ||||| || || ||||| ||||| || |||||
Sbjct 806137 TTCCACCTCCAGTGTAATCGTCTTGCCAGTAAGTGTCTTGACAAATATCTGCAT 806190
>seq287
Length=185442
Score = 107 bits (118), Expect = 2e-18
Identities = 135/183 (74%), Gaps = 2/183 (1%)
Strand=Plus/Minus
Query 42019 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 42078
|||| || |||||||| ||| ||| || || | || || || ||||| || ||||| |
Sbjct 123771 CCTTCTGGATATTGTAGTCACTCAGGGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAGA 123712
Query 42079 TGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 42138
| | |||||||||||||| ||| | || |||||||| ||| || |||| ||| |
Sbjct 123711 TCAATCGCTGCTGGTCGGGTGGGATGCCTTCCTTGTCTTGGATCTTGGACTTGA-CGTTG 123653
Query 42139 -CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197
| | ||||||| ||| || || |||| |||||||| |||||||| || ||||| ||
Sbjct 123652 TCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACG 123593
Query 42198 AAG 42200
|||
Sbjct 123592 AAG 123590
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543210599988160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |