Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq79 89.7 5e-13 seq324 87.8 2e-12 >seq79 Length=400725 Score = 89.7 bits (98), Expect = 5e-13 Identities = 283/434 (65%), Gaps = 20/434 (5%) Strand=Plus/Minus Query 153821 CTGATCGATGAAAGCGCCGCGATCGGCCGCCATGTCAATCAAGTTTTTACTGCTCATTTC 153880 |||||||||||| || || ||||| || ||||| | | || | | ||| ||||| Sbjct 384101 CTGATCGATGAATGCACCACGATCCGCTGCCATTTGCAGCACGGTCCGCTGGCTGATTTC 384042 Query 153881 CCACACAGTTTTGTAGACGGCTTTAATGTCGTCGGGTA---TGCGATCAATTTTCTGCAC 153937 ||| ||||| ||||||| || || ||||| |||| | || | || ||||| | Sbjct 384041 CCATACAGTCTTGTAGAGAGCCTTGATGTCCGCGGGCACATTGGGG---ATATTCTGAAT 383985 Query 153938 ---ACTGCCTCCGGCCGCTATAATGGAATTGCGCATGTGGTCGTCGTACAAATTTA-GTC 153993 || |||| |||| || || ||| ||||| ||| ||| | | ||| Sbjct 383984 GGAACCGCCTTCGGCG---ATGATTCGATTCTTCATGTTATCGGACCACAGACCCAAGTC 383928 Query 153994 GACATAAATCTT---CAACCAAGTGCTGGTTAATTACTTGAAAATCGCCGGCCAATACGC 154050 ||| | ||| || ||||| | || | ||||| || || || |||| |||| Sbjct 383927 GACGAGATCCTTTAGCAGCCAAG----GATTGACAACTTGGAATTCTCCCGCCAGAACGC 383872 Query 154051 GGCGCACATACAAATTGCTGGTGAACGGCTCGAACGATTCGTTGTTGCCTAATATTTGAG 154110 | || || | ||| ||| | |||||||| ||||||||||||| | ||||| | Sbjct 383871 GACGAGAGTAGATATTCGACGTGTATGGCTCGAAGCATTCGTTGTTGCCGAGAATTTGCG 383812 Query 154111 CTGTAGTTGCTGTGGGCATATACGCCACCAACAAAGAGTTTCGCAAACCGTGTTTTGCAA 154170 || | ||||| ||||| |||||| | | |||||| || | ||| | || |||| Sbjct 383811 AAGTCGAAGCTGTAGGCATGGGCGCCACAAGGAGAGAGTTGCGAACACCATACTTGGCAA 383752 Query 154171 TGCGCAATTTTAAATCTGCCCAATTCCACAAGTTGGTAGGTTGCACGTTCCACATGTCGT 154230 | ||| | | |||||| |||||||| | || |||||||||||||| | Sbjct 383751 TCTCTGCTTTCAGCGCGTCCCAATCCCACAAGTCAGAGGGAGTGACGTTCCACATGTCAT 383692 Query 154231 ATTGCAAAACACCC 154244 |||||| || |||| Sbjct 383691 ATTGCAGAATACCC 383678 >seq324 Length=116152 Score = 87.8 bits (96), Expect = 2e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| || || |||||||| || | || ||||| ||||||| || ||||||||| Sbjct 50569 GTGGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCTTCGAGTTGCTTGCCG 50628 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 || | || || || ||||||||||| ||||| ||||| || ||| || Sbjct 50629 GCGAAGATCAGGCGTTGCTGGTCGGGGGGAATCCCTTCCTTGTCTGGT 50676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499642776438560