Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq1 102 8e-17 seq287 96.9 3e-15 >seq1 Length=1141665 Score = 102 bits (112), Expect = 8e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || ||||| | || | ||||| || | |||||||| || || || ||||| |||| | Sbjct 806420 CCTCCGCGGAGACGAAGGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 806479 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || || || || ||||| || ||| | || | || |||||||| || || Sbjct 806480 AAGGTACGGCCGTCTTCAAGTTGTTTGCCGGCGAAAATGAGACGTTGCTGATCCGGGGGA 806539 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| || || ||||| | |||| |||||| | |||||| Sbjct 806540 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCGCTGGACTCGACC 806599 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 || | || | || ||||| || ||||| || || || ||||||||| || Sbjct 806600 TCAAGAGTGATGGTCTTGCCAGTAAGAGTCTTCACGAATATCTGCATGACT 806650 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || || || | || || |||||| || | || ||| || ||||| ||||| || | Sbjct 805964 CCTCCACGCAGTCTCAGCACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCCGAC 806023 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || || || | ||| || ||||| |||||| |||||| || ||||| || Sbjct 806024 AGTGTTCGTCCGTCCTCCAACTGCTTGCCAGCAAAGATCAGTCGCTGTTGGTCGGGCGGA 806083 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || ||||||||||| || ||| ||||| |||| |||| ||||| | || || || Sbjct 806084 ATACCCTCCTTGTCTTGAATCTTCGACTTGACGTTG-TCGATTGTGTCTGAGCTTTCCAC 806142 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | ||| ||||| || || || || ||||| |||||||| Sbjct 806143 CTCCAGTGTAATCGTCTTGCCAGTAAGTGTCTTGACAAATATCTGCAT 806190 >seq287 Length=185442 Score = 96.9 bits (106), Expect = 3e-15 Identities = 131/180 (73%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || || |||||||| || | || ||||| ||| || || || || || ||| ||||| Sbjct 123769 TTCTGGATATTGTAGTCACTCAGGGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAGATC 123710 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTC 127044 ||||||||||| ||||| || ||||| |||||||| ||| || ||||| |||| || Sbjct 123709 AATCGCTGCTGGTCGGGTGGGATGCCTTCCTTGTCTTGGATCTTGGACTTGACGTTG-TC 123651 Query 127045 GACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104 || ||||| | |||||| |||| ||| | || ||||| || || || || || || Sbjct 123650 GATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 123591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475498874221760