Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11]
324 sequences; 35,229,797 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq287 120 3e-22
seq324 100 3e-16
seq1 100 3e-16
>seq287
Length=185442
Score = 120 bits (132), Expect = 3e-22
Identities = 138/183 (75%), Gaps = 2/183 (1%)
Strand=Plus/Minus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||| |||||||||||||| || ||||| | || || || |||||||||||||| |
Sbjct 123771 CCTTCTGGATATTGTAGTCACTCAGGGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAGA 123712
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
|||| ||||||||||||| || | || |||||||| |||||| ||||| ||| |
Sbjct 123711 TCAATCGCTGCTGGTCGGGTGGGATGCCTTCCTTGTCTTGGATCTTGGACTTGA-CGTTG 123653
Query 46524 -CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582
| | ||||||| ||| || || || | |||||||| |||||||| || || || ||
Sbjct 123652 TCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACG 123593
Query 46583 AAG 46585
|||
Sbjct 123592 AAG 123590
>seq324
Length=116152
Score = 100 bits (110), Expect = 3e-16
Identities = 81/98 (83%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||| ||||| ||||||||||| |||||||| |||| ||||| ||||||||||||||
Sbjct 50575 TCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAG 50634
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500
|||| ||| |||||||||| || | | ||||||||
Sbjct 50635 ATCAGGCGTTGCTGGTCGGGGGGAATCCCTTCCTTGTC 50672
>seq1
Length=1141665
Score = 100 bits (110), Expect = 3e-16
Identities = 139/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||| ||||| ||||||||||| || || || |||| || | |||||||| || ||
Sbjct 806228 TCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTCTTCCAATTGCTTGCCAGCAAAG 806287
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
|||| || || || || | || | || |||||||| |||||| |||||| |||
Sbjct 806288 ATCAGACGTTGTTGATCCGGAGGGATGCCTTCCTTGTCTTGGATCTTGCTCTTGA-CGTT 806346
Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | | || || |||||||| || || | |||||| || ||||| || || || || ||
Sbjct 806347 GTCGATGGTATCACTCGATTCAACCTCGAGCGTGATCGTCTTGCCAGTAAGTGTCTTGAC 806406
Query 46582 AAAGATTTGCAT 46593
|| || |||||
Sbjct 806407 GAATATCTGCAT 806418
Score = 98.7 bits (108), Expect = 1e-15
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424
||||||| | | ||| | |||| || | ||| |||||| ||||| |||||||||
Sbjct 806418 TGCCTCCGCGGAGACGAAGGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGC 806477
Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484
| || || |||| || || || ||||||||||| || | || ||||| || | |
Sbjct 806478 TCAAGGTACGGCCGTCTTCAAGTTGTTTGCCGGCGAAAATGAGACGTTGCTGATCCGGGG 806537
Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544
| | || |||||||||| ||||| ||||| | | | |||||||| || || |
Sbjct 806538 GAATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCGCTGGACTCGA 806597
Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
| || | |||||||| ||||| || || || || || || || |||||
Sbjct 806598 CCTCAAGAGTGATGGTCTTGCCAGTAAGAGTCTTCACGAATATCTGCAT 806646
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565236110784480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |