Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1 129 6e-25 seq287 100 3e-16 seq324 91.5 1e-13 >seq1 Length=1141665 Score = 129 bits (142), Expect = 6e-25 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| |||||||| || || || || ||||| |||||||| | || |||||| ||| | Sbjct 806646 ATGCAGATATTCGTGAAGACTCTTACTGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 806587 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || || || | ||||| ||||| |||||| | || || Sbjct 806586 GACACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGATCAG 806527 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || ||||||| ||| |||||||| || || |||| || ||| | | |||||||||| Sbjct 806526 CAACGTCTCATTTTCGCCGGCAAACAACTTGAAGACGGCCGTACCTTGAGCGACTACAAC 806467 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| ||||| | || || || ||||| || ||| Sbjct 806466 ATCCAGAAGGAGTCTACTCTTCACTTGGTCCTTCGT 806431 Score = 93.3 bits (102), Expect = 4e-14 Identities = 153/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| |||||||| || || || || ||||| || ||||| |||| || || | | Sbjct 806418 ATGCAGATATTCGTCAAGACACTTACTGGCAAGACGATCACGCTCGAGGTTGAATCGAGT 806359 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 || | | | | |||| | |||| || |||| ||||| || || || || | || | Sbjct 806358 GATACCATCGACAACG--TCAAGAGCAAGATCCAAGACAAGGAAGGCATCCCTCCGGATC 806301 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 |||| || || || | || ||||| || |||| |||| || |||||| |||||||| Sbjct 806300 AACAACGTCTGATCTTTGCTGGCAAGCAATTGGAAGACGGCCGTACCCTCTCCGACTACA 806241 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||| |||||| | || || ||| | || || || Sbjct 806240 ACATCCAGAAGGAATCAACCCTCCATCTCGTCCTACG 806204 Score = 89.7 bits (98), Expect = 5e-13 Identities = 94/121 (78%), Gaps = 2/121 (2%) Strand=Plus/Minus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| ||||| ||||| ||||||||||||| || || | || ||||| ||| |||| Sbjct 806097 GACAAGGAGGGTATTCCGCCCGACCAACAGCGACTGATCTTTGCTGGCAAGCAGTTGGAG 806038 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCT 38455 |||| || || || ||||||||||| || ||||| ||| || ||||| |||||||| Sbjct 806037 GACGGACGAACACTGTCGGACTACAACATTCAGAAGGAGAGC-ACTCTGCACTTGGTGCT 805979 Query 38456 G 38456 | Sbjct 805978 G 805978 >seq287 Length=185442 Score = 100 bits (110), Expect = 3e-16 Identities = 133/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACA-GCGT 38311 ||||| || || ||||||||||| ||||||||| |||| |||||| | |||||| | Sbjct 123591 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCGACACGATC 123650 Query 38312 GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCT 38371 | |||| | || || |||| ||||| || || || || ||||||| ||||| | Sbjct 123651 GACAACG-TCAAGTCCAAGATCCAAGACAAGGAAGGCATCCCACCCGACCAGCAGCGATT 123709 Query 38372 CATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAA 38431 || | ||| ||||| || || || || | |||||||| | |||||||| ||||| || Sbjct 123710 GATCTTCGCCGGCAAGCAACTTGAGGATGGCCGCACCCTGAGTGACTACAATATCCAGAA 123769 Query 38432 GG 38433 || Sbjct 123770 GG 123771 >seq324 Length=116152 Score = 91.5 bits (100), Expect = 1e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| || || |||||| ||||||| || || || || | ||| ||||| || || || Sbjct 50672 GACAAGGAAGGGATTCCCCCCGACCAGCAACGCCTGATCTTCGCCGGCAAGCAACTCGAA 50613 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 |||| ||||| ||| ||||||||||||||| |||||| | || || || |||| || Sbjct 50612 GACGGCCGCACTCTCTCCGACTACAACATCCAGAAGGAATCCACCCTCCACCTGGTCCTC 50553 Query 38457 CGT 38459 ||| Sbjct 50552 CGT 50550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500170774300160