Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq285 98.7 4e-15 seq1 98.7 4e-15 >seq285 Length=186907 Score = 98.7 bits (108), Expect = 4e-15 Identities = 224/337 (66%), Gaps = 9/337 (3%) Strand=Plus/Minus Query 451261 TATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGA 451320 |||||| || | || ||||| || || || ||| ||| | || || || | | Sbjct 104472 TATGGTCCTGGCCAAGATGAAGGAGACTGCCGAAGCATACCTAGGCAAGCCCGTCAAGAA 104413 Query 451321 TGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGC 451380 ||| || | ||||||||||| || ||||| ||| || || ||||| || ||||| || Sbjct 104412 TGCCGTCGTCACTGTTCCCGCCTACTTCAACGATATGCAGCGTCAAGCCACAAAAGACGC 104353 Query 451381 AGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCT 451440 || || ||| | || | |||||||| || || | ||||| ||||| |||||||| || Sbjct 104352 TGGGCAAATTTCCGGGCTGAATGTTCTCCGTGTTGTCAATGAGCCTACCGCAGCTGCGCT 104293 Query 451441 AGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTT 451500 || ||||| || | | ||| | ||| || | || || | ||| | Sbjct 104292 CGCGTATGGCCTCG-------AGAAGGA--AGATGATCGCATCATCGCTGTCTACGATCT 104242 Query 451501 TGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAA 451560 ||||| || || ||||| |||| | || || | | || || ||||| || || Sbjct 104241 AGGTGGTGGCACCTTTGATATTTCTATCCTCGAGATCCAGAAGGGAGTTTTTGAGGTCAA 104182 Query 451561 GGCAACCAATGGTGATACTCATCTAGGAGGTGAAGAT 451597 | ||||||||||||| || || || || || |||||| Sbjct 104181 GTCAACCAATGGTGACACCCACCTGGGTGGCGAAGAT 104145 >seq1 Length=1141665 Score = 98.7 bits (108), Expect = 4e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || || ||||| || || || |||||||| || || || Sbjct 806646 ATGCAGATATTCGTGAAGACTCTTACTGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 806587 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | | || || ||||| || ||||| || ||||| || ||||| Sbjct 806586 GACACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGATCAG 806527 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||| | |||||| | || |||||||||||||| || | || ||| || || || Sbjct 806526 CAACGTCTCATTTTCGCCGGCAAACAACTTGAAGACGGCCGTACCTTGAGCGACTACAAC 806467 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| | || |||||||| || Sbjct 806466 ATCCAGAAGGAGTCTACTCTTCACTTGGT 806438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975710198298992