Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq179 104 3e-17 >seq179 Length=338939 Score = 104 bits (114), Expect = 3e-17 Identities = 265/395 (67%), Gaps = 15/395 (4%) Strand=Plus/Plus Query 154713 AATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCA 154772 || ||||| ||||| || | || || || ||||| || ||||| ||| | |||||| Sbjct 15056 AAGGTATGCTTGATCCCCGTCTCCGCTCACGGAACGAACCCTGCATCTGCGGCCATGGCT 15115 Query 154773 GGGATGAAAGTTGTAGGTGTCAAGTGTGAT--GATGAT-GGTAACATAGACATCAAAGAT 154829 || ||||||||||| | || || || || || || || | || ||||| || Sbjct 15116 GGAATGAAAGTTGTCCCATTGAAATGCGACACGAAGACCGGCAATCTGGATATCAAGGAC 15175 Query 154830 CTAGAGAAGAAA-GC---AATCATGAATACATTTGAACTGTCATGTATTATGATTACATA 154885 || || ||||| || || || || | ||| ||| | |||||| ||||||| Sbjct 15176 CTCAAGGAGAAATGCGAAAAACACAAAGA----TGACCTGGCTGCAATTATGGTTACATA 15231 Query 154886 CCCATCTACACATGGTGTATTTGAAACTAACATT--AGACAGATATGTAAGATCGTTCAT 154943 ||| ||| |||||| || ||| | | || | || || | ||| |||| || || Sbjct 15232 CCCGAGTACTTTTGGTGTTTTCGAACC-AGCAATCAAGGAAGTT-TGTCAGATTGTGCAC 15289 Query 154944 GACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCA 155003 || | || ||||| || || | || || || || || ||||| || | || || Sbjct 15290 GAACACGGCGGTCAAGTTTACATGGACGGTGCCAACCTCAATGCTCAAATCGGCCTGTGC 15349 Query 155004 AAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATT 155063 || || | || ||| || ||||| || ||||| ||| | || || || ||||||||| Sbjct 15350 AACCCCGGCGAAATTGGAGCTGATGTGTGCCATCTGAACCTGCACAAGACTTTCTGTATT 15409 Query 155064 CCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTAT 155098 || || |||||||| || |||||||| || || || Sbjct 15410 CCCCACGGAGGTGGTGGACCTGGCGTGGGACCGAT 15444 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 153216 GGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTTCTTGAGAATCCTAGT 153275 ||||||||||| || | ||| || || || || | |||| | || || ||||| Sbjct 13448 GGATACTATGGGACAACTACTCCACCGGTTATCACGAGAAATATCCTGGAAAATCCGGCG 13507 Query 153276 TGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTTA 153335 |||||||| ||| || || ||||| || ||||| ||||| | |||||| | | Sbjct 13508 TGGTACACTAGTTATACCCCGTATCAGGCGGAGATCAGCCAGGGTCGTTTGGAATCGCTG 13567 Query 153336 TTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCAAACGCATCTCTA 153395 || |||| |||||| || | || || || || || | | || || ||||||||| | Sbjct 13568 TTGAATTTCCAAACCCTTGTGACCGATCTCACGGGCCTTGCGATCGCCAACGCATCTGTC 13627 Query 153396 TTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 153428 | ||||||| ||||| || || ||||| ||| Sbjct 13628 CTCGATGAAGGCACTGCTGCTGCTGAAGCTATG 13660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579210454188160