Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq179 129 7e-25 >seq179 Length=338939 Score = 129 bits (142), Expect = 7e-25 Identities = 267/393 (68%), Gaps = 11/393 (3%) Strand=Plus/Plus Query 159388 AATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCA 159447 || ||||| ||||| || | || || || ||||| || |||||||| || | ||||| Sbjct 15056 AAGGTATGCTTGATCCCCGTCTCCGCTCACGGAACGAACCCTGCATCTGCGGCCATGGCT 15115 Query 159448 GGGATGAAAGTTGTAGGTGTCAAGTGTGAT--GATGAT-GGCAACATAGACATCAAAGAT 159504 || ||||||||||| | || || || || || ||||| | || ||||| || Sbjct 15116 GGAATGAAAGTTGTCCCATTGAAATGCGACACGAAGACCGGCAATCTGGATATCAAGGAC 15175 Query 159505 CTAGAGAAGAAA-GC---AATCATGAATACATTTGAACTGTCATGTATTATGATTACATA 159560 || || ||||| || || || || | ||| ||| | |||||| ||||||| Sbjct 15176 CTCAAGGAGAAATGCGAAAAACACAAAGA----TGACCTGGCTGCAATTATGGTTACATA 15231 Query 159561 TCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTGTTCATGA 159620 || ||| |||||| || ||| || |||| | | ||| ||||||| || || Sbjct 15232 CCCGAGTACTTTTGGTGTTTTCGAACCAGCAATCAAGGAAGTTTGTCAGATTGTGCACGA 15291 Query 159621 GAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAA 159680 | || ||||| || || | || ||||| || || ||||| || | || || || Sbjct 15292 ACACGGCGGTCAAGTTTACATGGACGGTGCCAACCTCAATGCTCAAATCGGCCTGTGCAA 15351 Query 159681 ACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCC 159740 || | || ||| || ||||| || ||||| ||| | || ||||| ||||||||||| Sbjct 15352 CCCCGGCGAAATTGGAGCTGATGTGTGCCATCTGAACCTGCACAAGACTTTCTGTATTCC 15411 Query 159741 ACATGGAGGTGGAGGTCCTGGCGTAGGTCCTAT 159773 || |||||||| || |||||||| || || || Sbjct 15412 CCACGGAGGTGGTGGACCTGGCGTGGGACCGAT 15444 Score = 96.9 bits (106), Expect = 4e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 157891 GGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTTGAGAATCCTAGT 157950 ||||||||||| || | || || || || || | |||| | || || ||||| Sbjct 13448 GGATACTATGGGACAACTACTCCACCGGTTATCACGAGAAATATCCTGGAAAATCCGGCG 13507 Query 157951 TGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTTA 158010 |||||||| ||| || || ||||| || ||||| ||||| | |||||| | | Sbjct 13508 TGGTACACTAGTTATACCCCGTATCAGGCGGAGATCAGCCAGGGTCGTTTGGAATCGCTG 13567 Query 158011 TTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCAAACGCATCTCTA 158070 || |||| |||||| || | || || ||||| || || |||| || ||||||||| | Sbjct 13568 TTGAATTTCCAAACCCTTGTGACCGATCTCACGGGCCTTGCGATCGCCAACGCATCTGTC 13627 Query 158071 TTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103 | ||||||| ||||| || || ||||| ||| Sbjct 13628 CTCGATGAAGGCACTGCTGCTGCTGAAGCTATG 13660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588048818392640