Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq78 87.8 1e-12 >seq78 Length=46961 Score = 87.8 bits (96), Expect = 1e-12 Identities = 197/293 (67%), Gaps = 6/293 (2%) Strand=Plus/Minus Query 30049 TTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGA---TGAGGTCCACG 30105 ||||| |||| || || || |||||||| | ||||||| || | | | | |||| Sbjct 42105 TTCCACGCGCTCAGAATAATCCGCCTGTCGTATGGGTTGGTCTTCAATTTTCGCACCACC 42046 Query 30106 GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCT 30165 | |||| | ||| ||||| || | ||||||||||| || |||| ||| || Sbjct 42045 TC--TTTG-ATCTGGTCCACTCCTTTGCCCGAGTAGTCAGCATGGCAGTCCTCGTATGCT 41989 Query 30166 GCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC 30225 || || || |||| ||| || || ||||| || || || ||||||||||| || | || Sbjct 41988 GCACCAAAGTGCCGCCATTGAAATCCGTAGACAGGGCCGAGGTCTCCCTCCTCGCGGTCA 41929 Query 30226 TCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCC 30285 | || ||| |||||| | || || | || || ||| ||||||| || | | || Sbjct 41928 ACAAATCCCAACTTGTCGAGGAATTCCCGCGAGCCATTGCCGTCCCAAATGTGGATGCCT 41869 Query 30286 TTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTC 30338 || ||||| ||| || ||||| | ||| || ||||||| || ||| Sbjct 41868 GCGTCAGAGAGAGGTTTCGATGTTGTGCAGCCTGATACAAACCACAACAACTC 41816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408615986471252