Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq1 127 2e-24 >seq1 Length=1141665 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 101255 CGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCA 101314 |||| || | ||| ||||| ||||| || || || ||||| |||| || || | | | Sbjct 806204 CGTAGGACGAGATGGAGGGTTGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCG 806263 Query 101315 TCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTA 101374 || ||||||||||| || ||||| |||| ||| |||||||| || || |||||||| || Sbjct 806264 TCTTCCAATTGCTTGCCAGCAAAGATCAGACGTTGTTGATCCGGAGGGATGCCTTCCTTG 806323 Query 101375 TCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACC 101434 ||||| || || || || | || | || ||| || ||| || || || |||| | Sbjct 806324 TCTTGGATCTTGCTCTTGACGTTGTCGATGGTATCACTCGATTCAACCTCGAGCGTGATC 806383 Query 101435 GTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTTACGCGAAGA 101482 || ||||| || | || || || |||||||||||| | |||| ||| Sbjct 806384 GTCTTGCCAGTAAGTGTCTTGACGAATATCTGCATGCCTCCGCGGAGA 806431 Score = 109 bits (120), Expect = 4e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101279 TCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAAT 101338 || || || || ||||| || | | |||| | || ||||| ||||| || ||||| Sbjct 806000 TCCTTCTGAATGTTGTAGTCCGACAGTGTTCGTCCGTCCTCCAACTGCTTGCCAGCAAAG 806059 Query 101339 ATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATT 101398 |||| |||||||| ||||||||||| || || || |||||||| || || || | Sbjct 806060 ATCAGTCGCTGTTGGTCGGGCGGAATACCCTCCTTGTCTTGAATCTTCGACTTGACGTTG 806119 Query 101399 TCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACA 101458 || | ||||| || ||||||| || || || | ||| ||||| || | || || ||| Sbjct 806120 TCGATTGTGTCTGAGCTTTCCACCTCCAGTGTAATCGTCTTGCCAGTAAGTGTCTTGACA 806179 Query 101459 AATATCTGCATGGTTACGCGAAG 101481 ||||||||||| | ||||||| Sbjct 806180 AATATCTGCATACCTCCGCGAAG 806202 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| | | ||| | || || ||||| ||||| || || || || ||||| ||| Sbjct 806420 CCTCCGCGGAGACGAAGGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 806479 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | | || || | ||| || || || || || | ||| || ||||| || ||| Sbjct 806480 AAGGTACGGCCGTCTTCAAGTTGTTTGCCGGCGAAAATGAGACGTTGCTGATCCGGGGGA 806539 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 ||||| || || || ||||| || || ||| | || | ||||| | || || Sbjct 806540 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCGCTGGACTCGACC 806599 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 |||||||||| || ||||| || | ||| || || |||||||||||| Sbjct 806600 TCAAGAGTGATGGTCTTGCCAGTAAGAGTCTTCACGAATATCTGCATG 806647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396276835195668