Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 8e-14 >seq1 Length=1141665 Score = 95.1 bits (104), Expect = 8e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 ||||| | |||||| |||||||| || |||||||||||||| ||||| || ||||||||| Sbjct 806264 TCTTCCAATTGCTTGCCAGCAAAGATCAGACGTTGTTGATCCGGAGGGATGCCTTCCTTG 806323 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATA 480737 ||||| ||||| ||||| || || |||||| | | | || || || || Sbjct 806324 TCTTGGATCTTGCTCTTGACGTTGTCGATGGTATCACTCGATTCAACCTCGAGCGTGATC 806383 Query 480738 GTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || ||||| ||||| || || Sbjct 806384 GTCTTGCCAGTAAGTGTCTTGACGAATATCTG 806415 Score = 86.0 bits (94), Expect = 4e-11 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 ||||||||||| || || || ||||| |||||||| ||||| || ||||| || |||||| Sbjct 806492 TCTTCAAGTTGTTTGCCGGCGAAAATGAGACGTTGCTGATCCGGGGGAATGCCCTCCTTG 806551 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATA 480737 || |||||||| |||||| || || || || || ||||| || || Sbjct 806552 TCCTGAATCTTGGACTTGACATTGTCGATGGTGTCGCTGGACTCGACCTCAAGAGTGATG 806611 Query 480738 GTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || |||||||| ||||| || || Sbjct 806612 GTCTTGCCAGTAAGAGTCTTCACGAATATCTG 806643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268165302067952