Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq179 111 2e-19 >seq179 Length=338939 Score = 111 bits (122), Expect = 2e-19 Identities = 263/393 (67%), Gaps = 11/393 (3%) Strand=Plus/Minus Query 138189 ATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGTAAATTT 138248 || || || |||||||| || |||||||| || ||||||||||| ||||| || | || Sbjct 15444 ATCGGTCCCACGCCAGGTCCACCACCTCCGTGGGGAATACAGAAAGTCTTGTGCAGGTTC 15385 Query 138249 AGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCATTTAGA 138308 ||||| || ||||| || ||| || | || || || || | || ||||| || Sbjct 15384 AGATGGCACACATCAGCTCCAATTTCGCCGGGGTTGCACAGGCCGATTTGAGCATTGAGG 15325 Query 138309 TTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATCTGTCTG 138368 || ||||| || | || || ||||| || | || || || |||| ||| | | || Sbjct 15324 TTGGCACCGTCCATGTAAACTTGACCGCCGTGTTCGTGCACAATCTGACAAACTTCCTTG 15265 Query 138369 ATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAGAGTTCA 138428 || || ||| || |||||| ||| || ||||||| |||||| | || ||| Sbjct 15264 ATTGCTGGTTCGAAAACACCAAAAGTACTCGGGTATGTAACCATAATTGCAGCCAGGTCA 15205 Query 138429 AATGTATTCATGATT---GC-TTTCTTCTCTAGATCTTTGATGTCTATGTTGCC-ATCAT 138483 | || || || || ||||| || || || ||||| || | ||||| || | Sbjct 15204 ----TCTTTGTGTTTTTCGCATTTCTCCTTGAGGTCCTTGATATCCAGATTGCCGGTCTT 15149 Query 138484 C--ATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATTAGT 138541 | || || || | |||||||||||||| |||||| | ||| ||||| || || Sbjct 15148 CGTGTCGCATTTCAATGGGACAACTTTCATTCCAGCCATGGCCGCAGATGCAGGGTTCGT 15089 Query 138542 TCCATGTGCTGACTCTGGTATCAGACATACATT 138574 ||| || || || | || |||| ||||| || Sbjct 15088 TCCGTGAGCGGAGACGGGGATCAAGCATACCTT 15056 Score = 82.4 bits (90), Expect = 9e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918 ||| || || || || ||||| ||||||| | | ||||||||| || || | | || Sbjct 13660 CATAGCTTCAGCAGCAGCAGTGCCTTCATCGAGGACAGATGCGTTGGCGATCGCAAGGCC 13601 Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978 || || || || | || |||||| |||| || | | |||||| | ||||| || Sbjct 13600 CGTGAGATCGGTCACAAGGGTTTGGAAATTCAACAGCGATTCCAAACGACCCTGGCTGAT 13541 Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTG 140038 ||| || ||||| || || ||| |||||||| ||||| || || | |||| | Sbjct 13540 CTCCGCCTGATACGGGGTATAACTAGTGTACCACGCCGGATTTTCCAGGATATTTCTCGT 13481 Query 140039 TATGACTGGGGGTGTAATGGTTCCATAGTATCC 140071 || || || || ||| | || ||||||||||| Sbjct 13480 GATAACCGGTGGAGTAGTTGTCCCATAGTATCC 13448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578996055056480