Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 1e-12 >seq1 Length=1141665 Score = 89.7 bits (98), Expect = 1e-12 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 || || || || || | ||||||| | || ||||| || || ||||||||||| | || | Sbjct 806009 ATGTTGTAGTCCGACAGTGTTCGTCCGTCCTCCAACTGCTTGCCAGCAAAGATCAGTCGC 806068 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 ||||| || || || || || || || ||||| || || || || || || | Sbjct 806069 TGTTGGTCGGGCGGAATACCCTCCTTGTCTTGAATCTTCGACTTGACGTTGTCGATTGTG 806128 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534 ||||| ||| || || || ||||| || || ||||| | ||| || | |||||||||| Sbjct 806129 TCTGAGCTTTCCACCTCCAGTGTAATCGTCTTGCCAGTAAGTGTCTTGACAAATATCTGC 806188 Query 192535 AT 192536 || Sbjct 806189 AT 806190 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||| || | ||| |||| || | ||| | || | || || ||| || || || Sbjct 806189 ATACCTCCGCGAAGCCGTAGGACGAGATGGAGGGTTGATTCCTTCTGGATGTTGTAGTCG 806248 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || | || |||||||| || ||||||||||| | | |||||||| || Sbjct 806249 GAGAGGGTACGGCCGTCTTCCAATTGCTTGCCAGCAAAGATCAGACGTTGTTGATCCGGA 806308 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| || || | || || || || | ||| |||||| Sbjct 806309 GGGATGCCTTCCTTGTCTTGGATCTTGCTCTTGACGTTGTCGATGGTATCACTCGATTCA 806368 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || || || || ||||| | ||| || | ||||||||||| Sbjct 806369 ACCTCGAGCGTGATCGTCTTGCCAGTAAGTGTCTTGACGAATATCTGCAT 806418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984475913177400