Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 3e-12 >seq1 Length=1141665 Score = 87.8 bits (96), Expect = 3e-12 Identities = 129/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 ||| || || || || | | |||| |||| ||||| || || |||||||| || | || Sbjct 806008 AATGTTGTAGTCCGACAGTGTTCGTCCGTCCTCCAACTGCTTGCCAGCAAAGATCAGTCG 806067 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 ||||||||| || || || || || || ||||| || || || || || || || Sbjct 806068 CTGTTGGTCGGGCGGAATACCCTCCTTGTCTTGAATCTTCGACTTGACGTTGTCGATTGT 806127 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 ||||| ||| || || || ||||| || || ||||| | ||| || | |||||||| Sbjct 806128 GTCTGAGCTTTCCACCTCCAGTGTAATCGTCTTGCCAGTAAGTGTCTTGACAAATATCTG 806187 Query 172067 CAT 172069 ||| Sbjct 806188 CAT 806190 Score = 86.0 bits (94), Expect = 1e-11 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 171913 CGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTT 171972 |||| |||||||| || |||||||| || | | ||||| || || || || ||||| | Sbjct 806262 CGTCTTCCAATTGCTTGCCAGCAAAGATCAGACGTTGTTGATCCGGAGGGATGCCTTCCT 806321 Query 171973 TATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAA 172032 | ||||| || || | || || || || ||||| |||||| || || || || | Sbjct 806322 TGTCTTGGATCTTGCTCTTGACGTTGTCGATGGTATCACTCGATTCAACCTCGAGCGTGA 806381 Query 172033 TGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 | || || ||||| | ||| || | |||||||||||| Sbjct 806382 TCGTCTTGCCAGTAAGTGTCTTGACGAATATCTGCAT 806418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905132334199200