Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq24 127 2e-23 seq79 95.1 1e-13 seq168 91.5 2e-12 seq223 86.0 8e-11 >seq24 Length=474574 Score = 127 bits (140), Expect = 2e-23 Identities = 108/133 (81%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 1592168 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGG 1592227 || ||||| | || | || |||||||| || ||||||||| ||||||| || |||| Sbjct 139107 CTTTTTGAAATCATTTTGGCGGCCAACTATCTGGACATCAAGGCTCTGCTTGACGTTGGC 139048 Query 1592228 TGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTT 1592287 |||||| |||| |||||||||||||||||||||||||| || ||||||||||| || || Sbjct 139047 TGCAAGACTGTCGCCAACATGATCAAGGGCAAGTCGCCAGAAGAGATCCGCAAAACGTTC 138988 Query 1592288 AACATCAAGTACG 1592300 || ||| || ||| Sbjct 138987 AATATCCAGAACG 138975 >seq79 Length=400725 Score = 95.1 bits (104), Expect = 1e-13 Identities = 196/292 (67%), Gaps = 0/292 (0%) Strand=Plus/Minus Query 1630062 GCACTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTT 1630121 || ||| || ||||| || || || | ||| ||||| || |||||||| | ||||| || Sbjct 382853 GCCCTGATCAACGTACCGTGCTGTATTGTTGAAGACACGAAGCATGGGGATCAGGCCATT 382794 Query 1630122 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAA 1630181 ||| || |||||||| || | || | || | ||| || | || || | Sbjct 382793 GGAGGTACCATTGGTGCCTGCAATATAAGATCCCGTGGCACGAATGCAATGAGCATTGAG 382734 Query 1630182 GCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCC 1630241 || || || || || | ||||||||| | || || ||||| ||||| || ||||| Sbjct 382733 ACCAATACCTCCAGCTGTCTTGGAGATCATGGCACAGGTCTTGAGGGTGTCATAAATGCC 382674 Query 1630242 CTCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGT 1630301 |||||| ||| |||||||||| | | ||||| || || ||| || || | || Sbjct 382673 CTCGATACTGTCTTCCTTCATGTCGATCAAGAAGCATGAGGATAGTTGAGGTTGAGGAGT 382614 Query 1630302 GCCGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATG 1630353 ||||| ||||| || || |||| || |||||| ||| | |||||| Sbjct 382613 TCCGGCATTGAACAGTGTCGGCGAAGCGTGGGTGAAGCACTTTTGGGACATG 382562 >seq168 Length=342851 Score = 91.5 bits (100), Expect = 2e-12 Identities = 133/186 (72%), Gaps = 9/186 (5%) Strand=Plus/Minus Query 1572466 GAGCAACTGGGCGATGCGCGCCTCGCCCTGGACAACGTGG---TCGGCGTCGGTGTGGTT 1572522 || ||||||||||||||| || |||| | || ||| ||||| ||| |||||| Sbjct 109626 GACCAACTGGGCGATGCGG---TCTCCCTTGTTGACCTGGAAATCGGCCTCGCCGTGGTT 109570 Query 1572523 GAAGAGCACGACGCCCACCTCGCCGCGATAGTCGGCATCGATGACGCCTGCGCCGACGTC 1572582 ||| |||| ||| ||||||||||| ||||| || ||||||||||| ||||| ||| Sbjct 109569 GAACAGCAGGACCTTGACCTCGCCGCGGTAGTCTGCGTCGATGACGCCCGCGCCCGTGTC 109510 Query 1572583 GAT---GCCCCTGACGGCCAGGGACGAGCGCGGCGCCACGCGCCCATAGTAGCCCGCGGG 1572639 ||| | | |||||||| ||| || ||||| ||||| || || ||| |||| Sbjct 109509 GATGAAGTGTTTCGCGGCCAGGCCCGACCGGGGCGCGACGCGGCCGTACGTGCCTTCGGG 109450 Query 1572640 TATGGC 1572645 |||| Sbjct 109449 CGTGGC 109444 >seq223 Length=821444 Score = 86.0 bits (94), Expect = 8e-11 Identities = 119/164 (73%), Gaps = 6/164 (4%) Strand=Plus/Plus Query 868763 GGGAACGGGTTGGGCGTCTTGTAGT---GCTTTTCGCATCCGAGCGACGCGAGCAGGCGG 868819 ||||| ||||| ||| ||||||| |||| | || | | |||| | |||| |||| Sbjct 601164 GGGAAGGGGTTTTGCGCATTGTAGTATCGCTTGTTGCC-CAGGGCGAGG--AGCAAGCGG 601220 Query 868820 TCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCACC 868879 || ||||||||||| |||||||| |||||||| | ||||||||| | | || || Sbjct 601221 TCAGCGACAAACTCAATGTACTGACACATGAGCTTCGAGTTCATGCCAAGCAATGCGACA 601280 Query 868880 GGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTC 868923 || || | ||| | | ||| || || ||||||| ||| ||||| Sbjct 601281 GGAAGGGCATCGGTGAGAAATTCCTTTTCGATCTTGACAGCCTC 601324 Score = 86.0 bits (94), Expect = 8e-11 Identities = 192/284 (68%), Gaps = 11/284 (4%) Strand=Plus/Plus Query 869172 TATGCGAACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGC 869231 ||||| ||||| || ||| ||| | |||||| |||| |||||| |||||||| | Sbjct 601399 TATGCATGCCTTCATCACGAGAGATGAGCTCGTTGGAGAAGGTGAGGCCAGGCATGAGAC 601458 Query 869232 CGCGCTTCTTGAGCCAAAAGATGGC-GCAGAAACTGCCCGAGAAAAAGATGCCCTCGACG 869290 | |||| ||||| ||||||| ||| | | || ||||| |||||||| ||||| Sbjct 601459 CCTTGCTCTTCAGCCAGAAGATGGATGCAAACGAT-CCAGAGAAGAAGATGCCTTCGACA 601517 Query 869291 GCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTT---GATCCAC 869347 || || ||| | | || || | |||||| | ||| ||| |||| |||||| Sbjct 601518 GCAGCGAAGGCAACCAGACGTTGAGCAAAGCT--CGA----CTCTTTGTCTGAGATCCAT 601571 Query 869348 TTCATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGG 869407 || |||||||| || || || | | | || | ||||||| |||| ||| || Sbjct 601572 CGCAAAGCCCAGTCTGCTTTCTTGCGAATGCAAGGGATTGTGTCGACGGCGTCAAACAGA 601631 Query 869408 TGGTCCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAG 869451 | ||| || || ||||| ||||||||||| ||||| || Sbjct 601632 TACGTCTTCTCTTTGGGATCCTTCACATAGGTGTCAATCAGAAG 601675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107112611042708