Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq1 116 2e-21 seq324 107 1e-18 seq287 107 1e-18 >seq1 Length=1141665 Score = 116 bits (128), Expect = 2e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| | || ||||| |||| ||| | |||||||||||||||||||| |||||||| Sbjct 805964 CCTCCACGCAGTCTCAGCACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCCGAC 806023 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || | || | || |||| ||||| || || ||||||||||| || ||||| |||| Sbjct 806024 AGTGTTCGTCCGTCCTCCAACTGCTTGCCAGCAAAGATCAGTCGCTGTTGGTCGGGCGGA 806083 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||||||||| | || || |||||| | || | || | || || Sbjct 806084 ATACCCTCCTTGTCTTGAATCTTCGACTTGACGTTGTCGATTGTGTCTGAGCTTTCCACC 806143 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | || || ||||| || || || ||||| ||||| |||||||| Sbjct 806144 TCCAGTGTAATCGTCTTGCCAGTAAGTGTCTTGACAAATATCTGCAT 806190 Score = 104 bits (114), Expect = 2e-17 Identities = 155/218 (71%), Gaps = 8/218 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||||| || ||||||||| ||||| ||||| | | | || | || Sbjct 806435 AGGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTACGGCCGTCT 806494 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || ||||| || |||||||| || || |||||||| || | || | ||||||||||| Sbjct 806495 TCAAGTTGTTTGCCGGCGAAAATGAGACGTTGCTGATCCGGGGGAATGCCCTCCTTGTCC 806554 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || ||||| || | ||||| || ||| |||||| |||| || || Sbjct 806555 TGAATCTTGGACTTGAC--AT--TGTCGATGGTGTCGCTGGACTCGACCTCAAGAGTGAT 806610 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGA 34979 |||||| || || || ||||| || || |||||||||| Sbjct 806611 GGTCTTGCCAGTAAGAGTCTTCACGAATATCTGCATGA 806648 >seq324 Length=116152 Score = 107 bits (118), Expect = 1e-18 Identities = 95/119 (80%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||| | |||| |||||||| ||||| ||||| || || |||| | || Sbjct 50554 AGGACCAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCT 50613 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || |||||||| |||||||||||||| ||||||||||| | || | ||| |||||||| Sbjct 50614 TCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGGGGAATCCCTTCCTTGTC 50672 >seq287 Length=185442 Score = 107 bits (118), Expect = 1e-18 Identities = 133/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 ||||||| || || ||||| ||| |||| |||| || |||||||| |||||||||| Sbjct 123771 CCTTCTGGATATTGTAGTCACTCAGGGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAGA 123712 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 ||| ||| |||||||| | || | || |||||||| | || || |||||| Sbjct 123711 TCAATCGCTGCTGGTCGGGTGGGATGCCTTCCTTGTCTTGGATCTTGGACTTGACGTTGT 123652 Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967 | |||| || | |||||| || | ||| |||||||| |||||||||||||| || | Sbjct 123651 CGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 123592 Query 34968 AG 34969 || Sbjct 123591 AG 123590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325691513920556