Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq1 113 3e-20 >seq1 Length=1141665 Score = 113 bits (124), Expect = 3e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 29557 TGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCC 29616 || ||||| | || | ||||||||| || || ||| || || |||||||| || ||| Sbjct 805961 TGACCTCCACGCAGTCTCAGCACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCC 806020 Query 29617 GCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGC 29676 | | || || || || | || ||||||||| | |||| || || || || ||| Sbjct 806021 GACAGTGTTCGTCCGTCCTCCAACTGCTTGCCAGCAAAGATCAGTCGCTGTTGGTCGGGC 806080 Query 29677 GGAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTC 29735 ||||||||||| |||||||| ||| || | ||||| | || | ||||| || ||| Sbjct 806081 GGAATACCCTCCTTGTCTTG-AATCTTCGACTTGACGTTGTCGATTGTGTCTGAGCTTTC 806139 Query 29736 TACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || || |||||||| | || || |||||||||||||| Sbjct 806140 CACCTCCAGTGTAATCGTCTTGCCAGTAAGTGTCTTGACAAATATCTGCAT 806190 Score = 105 bits (116), Expect = 5e-18 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATC-CGC 29618 ||||| | | ||| || ||||| ||||| || || || || || ||||| || || | | Sbjct 806420 CCTCCGCGGAGACGAAGGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 806479 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || ||| || || || ||||||||||| || | || | | |||||||||||| || Sbjct 806480 AA-GGTACGGCCGTCTTCAAGTTGTTTGCCGGCGAAAATGAGACGTTGCTGATCCGGGGG 806538 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 ||| ||||| ||||| || ||| || | |||||| | || | ||||| || | Sbjct 806539 AATGCCCTCCTTGTCCTG-AATCTTGGACTTGACATTGTCGATGGTGTCGCTGGACTCGA 806597 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | |||||||| || || |||||||| | || || || ||||||||||| Sbjct 806598 CCTCAAGAGTGATGGTCTTGCCAGTAAGAGTCTTCACGAATATCTGCAT 806646 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || || | ||| || || ||||| || || ||||| || || | | ||| || Sbjct 806204 CGTAGGACGAGATGGAGGGTTGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCG 806263 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || | ||| ||||||||| | |||| | ||| |||||||| || || || || ||| Sbjct 806264 TCTTCCAATTGCTTGCCAGCAAAGATCAGACGTTGTTGATCCGGAGGGATGCCTTCCTTG 806323 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 ||||| | || ||||| | || | || ||| ||| || || || || || Sbjct 806324 TCTTGGATCTTGCTCTTGACGTTGTCGATGGTATCACTCGATTCAACCTCGAGCGTGATC 806383 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||||||| | || || || ||||||||||| Sbjct 806384 GTCTTGCCAGTAAGTGTCTTGACGAATATCTGCAT 806418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385217678865684