Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq1 107 1e-18 >seq1 Length=1141665 Score = 107 bits (118), Expect = 1e-18 Identities = 155/215 (72%), Gaps = 8/215 (4%) Strand=Plus/Plus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 |||||| || ||||||||||| || || |||||||| || || ||||| ||| |||| || Sbjct 805981 CACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCCGACAGTGTTCGTCCGTCCTC 806040 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 ||| || || || ||||| |||| ||||| || || |||| | ||| || ||||| Sbjct 806041 CAACTGCTTGCCAGCAAAGATCAGTCGCTGTTGGTCGGGCGGAATACCCTCCTTGTCTTG 806100 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTC---GCTTGATTCCACGTCAACCGTGATCG 33715 ||| ||| | | || | ||| | ||||| ||| |||||| || | || |||| Sbjct 806101 AATCTTC-GACTTGACGTTGTCGATTGTGTCTGAGCT---TTCCACCTCCAGTGTAATCG 806156 Query 33716 TTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || || || | || || ||||| ||||||||| Sbjct 806157 TCTTGCCAGTAAGTGTCTTGACAAATATCTGCATA 806191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328702702030080