Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1 122 8e-23 >seq1 Length=1141665 Score = 122 bits (134), Expect = 8e-23 Identities = 168/231 (73%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || ||||| | |||| |||||| || | || |||||||| ||||||||||| || | | Sbjct 805964 CCTCCACGCAGTCTCAGCACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCCGAC 806023 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||||| |||| |||| |||||| || ||||| |||| ||||| ||||| | ||| Sbjct 806024 AGTGTTCGTCCGTCCTCCAACTGCTTGCCAGCAAAGATCAGTCGCTGTTGGTCGGGCGGA 806083 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTC 35685 | | ||||||||| ||||| ||| | |||| | | ||||| ||| ||| Sbjct 806084 ATACCCTCCTTGTCTTGAATCTTCGACTTGA-CGTTGTCGATTGTGTCTGAGCT---TTC 806139 Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||||||| || ||||| || || || | || || |||||||||||||| Sbjct 806140 CACCTCCAGTGTAATCGTCTTGCCAGTAAGTGTCTTGACAAATATCTGCAT 806190 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 ||||| || | ||| |||||| || |||||||| ||| |||||| || |||| || Sbjct 806438 ACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTACGGCCGTCTTCA 806497 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 || || || || || || || | || ||||| |||| |||| || |||||||||| Sbjct 806498 AGTTGTTTGCCGGCGAAAATGAGACGTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGA 806557 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 ||||| ||| | | | | | |||||||| || || ||||| | ||||| || || Sbjct 806558 ATCTTGGACTTGACATTGTCGATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGTCTTG 806617 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || | ||| ||||| ||||||||||| Sbjct 806618 CCAGTAAGAGTCTTCACGAATATCTGCAT 806646 Score = 105 bits (116), Expect = 6e-18 Identities = 140/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| |||| | ||| || |||| |||| ||||| || ||||| Sbjct 806228 TCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTCTTCCAATTGCTTGCCAGCAAAG 806287 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || || || |||| ||| | || |||||||| |||||| ||| | ||| Sbjct 806288 ATCAGACGTTGTTGATCCGGAGGGATGCCTTCCTTGTCTTGGATCTTGCTCTTGAC-GTT 806346 Query 35666 GCC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | || || |||||||| ||||| | ||||||||| || || || | || || || Sbjct 806347 GTCGATGGTATCACTCGATTCAACCTCGAGCGTGATCGTCTTGCCAGTAAGTGTCTTGAC 806406 Query 35725 AAATATCTGCAT 35736 ||||||||||| Sbjct 806407 GAATATCTGCAT 806418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450791774285920